Input parameters:

  Query = AT1G09645.1 (Len=106)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT1G09645.1, Len=106):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRQNSATGGLSWRRLLFFASIGLQFFLGLSGDSKNTNAGVKTESHTSSSKTGTKVILVLVGFVAVAMFSFFLYKLWQKKK 80  
WD40-rpts      (________________________________________________WD 1___________________________

Query       81 RDEQYARLLKLFEEDDELEVELGLRD 106 
WD40-rpts      _____________________)    

1 WD40-repeats found in QUERY=AT1G09645.1 (Len=106):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-102      2.91  234.78  0.04184       17.5%     -2.25

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-102    MRQNSATGGLSWRRLLFFASIGLQFFLGLSGDSKNTNAGVKTESHTSSSKTGTKVILVLVGFVAVAMFSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVEL

   WD40 Template    TGECLRTLS------------------GHTSGVTSVSFSPDGKRLVSGSEDGTIKV--------------------------------------WD------