Input parameters:

  Query = AT1G14990.1 (Len=122)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (AT1G14990.1, Len=122):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMILDVCSEVIKIQKLRRAVSYAGFYCFTAALTFFYTNNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCYESE 80  
WD40-rpts                             (___________________________WD 1_________________________

Query       81 DWGPVEFCIMAKHFDRQGKSPYVYHSQYMAHLLSQGQLDGSG 122 
WD40-rpts      __)                                       

1 WD40-repeats found in QUERY=AT1G14990.1 (Len=122):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    24-83       3.07  241.65  0.03395       20.0%      7.92

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   24-83     GFYCFTAALTFFYTNNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCYESEDWG

   WD40 Template    G------------ECLRTLSGHTSGVTSVSFSPDGKRLVSG---------SEDGTIKVWD