Input parameters:

  Query = C06E2.1 (Len=291)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C06E2.1, Len=291):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNRTRARKHYPYGIQIQDCDLIYNVWQYNGSIYGPYAAEAVFKFYLEGKLKFPTRIQITESRKKGATGFLEWFGTIQDLQ 80  
WD40-rpts                       (_______________________________________WD 1___________________

Query       81 DIFGTQDFLPKRLSQFKGKWTLPEVHPNPALYKYESNTFITFNLSTFLNNLSTSSYCPFVTGFRGDVAEEHVLPLSSVVE 160 
WD40-rpts      ____________________)                                                           

Query      161 LARRILMDYSNLEPDERSLLHILLTEVFSPRVCDVCQKVMEDAHSYLIHALSLIHLENAIVKCSRAFTIEFDYLKLRKLF 240 
WD40-rpts                                                                                      

Query      241 EDVKRYTFERKLARMMSKISANSPDFPGHQFDWNPSFNSVNFYPGVSLPLQ 291 
WD40-rpts                                                         

1 WD40-repeats found in QUERY=C06E2.1 (Len=291):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    18-101      2.82  230.99  0.04695       10.0%     14.97

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-101    DCDLIYNVWQYNGSIYGPYAAEAVFKFYLEGKLKFPTRIQITESRKKGATGFLEWFGTIQDLQDIFGTQDFLPKRLSQFKGKWT

   WD40 Template    TGECLRTLSGHTSGVTSV----------------------SFSPDGKRLVS-----GS----------EDGT-------IKVWD