Input parameters:

  Query = C08H9.7 (Len=447)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C08H9.7, Len=447):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNSLNTTYNPLLKYHKLSLKTRALTQGENIVKPCVILVAIILISTPFVFVFSKLIILACCKCQTVSTSINALMLNNSTTS 80  
WD40-rpts                                                                                      

Query       81 QHALKSNETISPPAALCGKRIVGYFAEFENSGLTRRHLQMVTHIIYLFARPTNGVMTLDGERTRRKFQEMRSKAREVSST 160 
WD40-rpts                                                        (_____________________________

Query      161 VKVMISVGGHDHSGAFSAIMSNEASRSVFIKSIVSFVKNEDIDGIEIFWMWPKHRDVNNYSIFIQDLRNEFTELQKRTNR 240 
WD40-rpts      ________WD 1_____________________________________)                              

Query      241 KNEYIISLLVPKKSYWSFDFEDFLKFVDFFNIYSTQFREKQVGPDSPLYGGEGRNIDETMKYYTCKTGQPSKFNIFVSFH 320 
WD40-rpts                                                                                      

Query      321 GTFWKDAELPLRNDFDDIFKDKNLTKGAFAVRWRELLQQKWNLEDIKFHNLTKTSYIWIPGPPTWFMTLEDKRSLREKTK 400 
WD40-rpts                                                                                      

Query      401 YVADYNIGGITMWTIDQDDDDHTLLKVVSSAELCTGKEKNEINYKCD 447 
WD40-rpts                                                     

1 WD40-repeats found in QUERY=C08H9.7 (Len=447):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   131-210      2.87  233.26  0.04382       22.5%     -0.59

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  131-210    PTNGVMTLDGERTRRKFQEMRSKAREVSSTVKVMISVGGHDHSGAFSAIMSNEASRSVFIKSIVSFVKNEDIDGIEIFWM

   WD40 Template    TGECLRTLSGHTS----------------------GVTSVSFSPDGKRLVSG------------------SEDGTIKVWD