Input parameters:

  Query = C13A10.2 (Len=126)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C13A10.2, Len=126):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYCVYFCVLLSICATTSALPFYSKRELAPSLTLQRINALKDTIDQLNDINKAMRCREKANELAAKRSKRMISPSLRLSEL 80  
WD40-rpts      (______________________________________________WD 1_____________________________

Query       81 IDPLVAGESVPTEKTQPVEENPQEIEQNPEEYDECVGFYHDIPYYF 126 
WD40-rpts      ________________)                             

1 WD40-repeats found in QUERY=C13A10.2 (Len=126):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-97       2.83  231.48  0.04627       22.5%     -4.73

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-97     MYCVYFCVLLSICATTSALPFYSKRELAPSLTLQRINALKDTIDQLNDINKAMRCREKANELAAKRSKRMISPSLRLSELIDPLVAGESVPTEKTQP

   WD40 Template    TGECL-----------RTLSGHTSGVTSVS----------------------------------------FSPDG------KRLVSGSEDGTIKVWD