Input parameters:

  Query = C16D2.1b (Len=194)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C16D2.1b, Len=194):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNFFQNYFRSSSTKLSTELGDVATPAVPSPIEATTAVCATPNQARRVIKTIDGQQLVLCANDVKYLSVVENMFANLNNLS 80  
WD40-rpts                          (___________________________WD 1___________________________)

Query       81 SDASDEQFIVIPISIESKTMQKIIDWSRAAKKIDEKTLDFCQFFPNLTLKECIQILEASLFLETSYLGKCAAKWVASKLE 160 
WD40-rpts                                                                                      

Query      161 GKSTGEMAQILEVAHVGLDPTSEQQLAQFRRVTL 194 
WD40-rpts                                        

1 WD40-repeats found in QUERY=C16D2.1b (Len=194):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    21-80       4.05  281.76  0.00989       20.0%     13.06

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   21-80     DVATPAVPSPIEATTAVCATPNQARRVIKTIDGQQLVLCANDVKYLSVVENMFANLNNLS

   WD40 Template    GECLRTLSGHTSGVTSVSFSP----------DGKRLVSGSEDGT-----------IKVWD