Input parameters:

  Query = C31E10.8 (Len=1333)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C31E10.8, Len=1333):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTSKTTEIQHAYSIAGFLHMKYLGGALALWRPRRRFYFAIDEITEELVYYKTEGEFTSHREPVGSFPISNSVITLDENNH 80  
WD40-rpts                                                                                      

Query       81 LIFILHVSGRSIEFEADNEESCRAWLHTFCNRYSEAERTKYQMMTHRKIKKASSLPDQESTTAATDQHIPFRKHSVPAQN 160 
WD40-rpts                                                                                      

Query      161 LVTTRNFIMPPPDIAEGYLPDEEMDDWVTQWLTNEKFHNFPSCTDMTTPTSTNQSKVDTCSESERAESEELDLLREITNN 240 
WD40-rpts                                                                                      

Query      241 QKKKIEDMKHEMNAMTLHIDQMRKRADSTNGTDRDTLSAQNKFLNSEILRMSAKCEILTMQSSGNRKSHRENKRLTEELQ 320 
WD40-rpts                                                                                      

Query      321 LLRCDYVYAIQSTIRIPLHDNTAMDVMSVKLLGGETHKSRLIQLMAEARQHDPSLPTLQSLLQGIYVDSFGFRISFKEEP 400 
WD40-rpts                                                                                      

Query      401 NALHYMATKLNHFYANRSKSASEHKYNWKRFLEENDFIDLTPETKIMCRKGIPNSLRATVWKILINQQVEDLKNVYGKYY 480 
WD40-rpts                                                                                      

Query      481 YRNLCNIQGGEDEKTYSDVHQKQINLDLLRTMPNNVHFMSANSKGVTQLLQVLHAFCLHNSQIGYCQGMNFLAATALLFV 560 
WD40-rpts                                                                                      

Query      561 GPEDAFWFLIAVTERYFDKTYFDSNLTGAQADQEVLKGLLEVQHPKIMKHLKSLDIDVASFTLNWFISLFFDAVPFNTLL 640 
WD40-rpts                                                                                      

Query      641 RIWDCFLLEGPKVLFRFAIVLIGKHEEEIISRGDAIGIMRVSKAATKLAFDEEAIVNMAFRIPNLPTRIELKNMQLQYVN 720 
WD40-rpts                                                                                      

Query      721 LLAERLEKKMRRANEFVKSIANNLTNEKLISNIFIDTFTPNTGFIVSGHHLMGKIAGIKVVKDKACMKNIDVEFDCRVMS 800 
WD40-rpts                                                                                      

Query      801 ICMVRKDMAYVSLISGYLIAAHVNSENEWSILWELKLPDVATFLIHQENTLFAGLANGILTVFENAGERWPTSVQMWHMP 880 
WD40-rpts                                                                                      

Query      881 LSSSPLTNAVIHDDTLVVATACKLITLDAQSLTTLSTTHVASSNVGSGVIYFDKITCMTESPFGIFLTTNHSTLIQLWHD 960 
WD40-rpts                                                                     (________________

Query      961 TACNLLYDISFDHKTRKPSLSDTENSNYVESMLFNDETLWLGTSDGYVFIYNVENETGKEEVKYKLKRFPGEKRPSRRGS 1040
WD40-rpts      ________________WD 1_______________________________)                            

Query     1041 SARSQRLGSLIENNDESDDNETVPIFCAEKRASRVSISIDRETHQYSIASFQQNPEDVDFPGSTYSRLNSSSSKTLRSPM 1120
WD40-rpts                                                                                      

Query     1121 KKGFSADSAVSVFSSEPNELIEKCDENFLSVKKEKDSPRFRDNRFFSSTNSSCTSMEYDDTFELYSDEERSRRRVAITSH 1200
WD40-rpts                                                                                      

Query     1201 KRFATPSKQLNLQRKDLTFDDPYIVPVPESADKETSNDVEDSAVVSSVRLSLFMKLKISETSVRKIISSGEHHILTCSGE 1280
WD40-rpts                                                                                      

Query     1281 FGADEAVLLWRKDISTNLWINDPVTHEVPNIPPSSKTSSSTPASIQSLSFRSK 1333
WD40-rpts                                                           

1 WD40-repeats found in QUERY=C31E10.8 (Len=1333):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   944-1012     4.04  281.74  0.00990       25.0%     16.61

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  944-1012   GIFLTTNHSTLIQLWHDTACNLLYDISFDHKTRKPSLSDTENSNYVESMLFNDETLWLGTSDGYVFIYN

   WD40 Template    GECLRTLS--------------------GHTSGVTSVSFSPDGK----------RLVSGSEDGTIKVWD