Input parameters:

  Query = C32E12.3 (Len=643)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (C32E12.3, Len=643):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MILFLFLFLLLGFCIAPLSAQSPSTSDAPGALLSSLVGKSHQKLPLAPSMEALELMGVQFVDALIKKGQMEMAKGAFKTQ 80  
WD40-rpts                    (___________________________________________________________WD 1__

Query       81 LEVLEKVHPDQFDKYKKLKVDDLAADAVMQQAEMAKLQPKSGNAFIDMLNGNGIPIGSSIRGLEDAIRTQRDMENTDPSE 160 
WD40-rpts      _________________________________________________________)                      

Query      161 QIAKAVMDKFQTQILPGLVANMIAGKNPFKMPQQMRKAQAAPSSVFQQALAQRAMLGKNAPVAGGRGEEQRMMMNRVDQR 240 
WD40-rpts                                                                                      

Query      241 MQQRELQEEDEDDDDLEDEDVPRRRSSDGEPQSEAEHQRRDLARRLKSSPRLKELLQNAEVQSLLSYQRMRDSPLSKRRP 320 
WD40-rpts                                                                                      

Query      321 LAMNDEDESAFRAMEARAKLDQKSQLVLGLHGFGESDDDEDEEDENLIDPSENSFRRAPLRLSSGFVEKLKSNDELKSAL 400 
WD40-rpts                                                                                      

Query      401 DRIKYRVDDVEKYLAPKPMEFNPKPQPGYFAPRKIPTRPRKMLPLLIGSDPKVQEEIRRHPSTEWKIAKESRVLTNLKNN 480 
WD40-rpts                                                                                      

Query      481 PSLAALFMDDKLENTLKGRQMLTDEQKGRTRVKTIRALPRLFGAPTAKAEMIDAKVFQDIEERPIPPLFFEPKGRHTRLR 560 
WD40-rpts                                                                                      

Query      561 WTGANEKEIPGLGSRFILPSLDPTMPALNTAFSTQGRARDEWDTMFKIPNNWNPGDEVGFKMNSKTKRFVGGNGAFDMPA 640 
WD40-rpts                                                                                      

Query      641 LGL 643 
WD40-rpts         

1 WD40-repeats found in QUERY=C32E12.3 (Len=643):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    15-138      3.40  254.99  0.02257       27.5%     -10.44

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   15-138    IAPLSAQSPSTSDAPGALLSSLVGKSHQKLPLAPSMEALELMGVQFVDALIKKGQMEMAKGAFKTQLEVLEKVHPDQFDKYKKLKVDDLAADAVMQQAEMAKLQPKSGNAFIDMLNGNGIPIGS

   WD40 Template    GECLRTLSGHTSGVT-------------SVSFSP-----------------------------------------D-----GKRLV--------------------SGS------EDGTIKVWD