Input parameters:

  Query = F02E9.10b (Len=387)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F02E9.10b, Len=387):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDDMMNEEGIPQATIVAKYEKAHNRSVVGIWSFRFCGQIGMLSVSHDCSKLWILQEDSSNNISLDERMVLAKWRTAIQAA 80  
WD40-rpts                  (__________________WD 1_________________)(___________WD 2___________

Query       81 DISVDGKYMVAVGMNSIVYEVELSRDAKYLAIGQLDGAIEMLYSENFKNYHKYEVHSMRIRKIEFLPNEERFLSACDDRL 160 
WD40-rpts      )   (_________________WD 3________________)   (_________________WD 4____________

Query      161 IKLHSLSEFTETDPSRSTKAIRVYSAHDAPVTGLTIDEKSGGTRFASSSASSQIFIWHIEMTTPIMSITNEHTSTISALS 240 
WD40-rpts      ____)            (__________________WD 5_________________)    (_________________

Query      241 FSPTSRHLLSGGDDAMILIYRIPGVGENTPVHVAYYPPVEQPSDITEPESSSQLAEVPSASPYDEHDQQENEPPSDYTQE 320 
WD40-rpts      WD 6________________)(_______________WD 7______________)                        

Query      321 GGHEYYRSHEEYDAAQYQEYNPYAEPRTPPREDDEEIGNYVYNSTTEHQQNNESASPPAHEQYDPSA 387 
WD40-rpts                                                                         

7 WD40-repeats found in QUERY=F02E9.10b (Len=387):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    13-53       6.22  371.50  0.00061       17.5%     55.18
  WD 2:  Seg  5    54-81       3.02  239.36  0.03640       17.5%     32.94
  WD 3:  Seg  8    85-123      8.92  483.30  1.9e-05       30.0%     53.14
  WD 4:  Seg 12   127-165      9.22  495.47  1.3e-05       20.0%     54.61
  WD 5:  Seg 16   178-218      7.76  435.16  8.5e-05       27.5%     49.27
  WD 6:  Seg 20   223-261      9.33  500.02  1.1e-05       30.0%     50.47
  WD 7:  Seg 24   262-296      6.27  373.86  0.00057        7.5%     38.36

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-53     ATIVAKYEKAHNRSVVGIWSFRF--CGQIGMLSVSHDCSKLWI
   WD 2   54-81     -----------LQEDSSN-NISL--DE-RMVLAKWRTAIQAAD
   WD 3   85-123    -DGKYMVAVGMNSIVYEV-ELSR--DAKYLAIGQLDGAIEMLY
   WD 4  127-165    -FKNYHKYEVHSMRIRKI-EFLP--NEERFLSACDDRLIKLHS
   WD 5  178-218    -TKAIRVYSAHDAPVTGL-TIDEKSGGTRFASSSASSQIFIWH
   WD 6  223-261    -TPIMSITNEHTSTISAL-SFSP--TSRHLLSGGDDAMILIYR
   WD 7  262-296    -----IPGVGENTPVHVA-YYPP--VEQPSDITEPESSSQLAE

   WD40 Template    TGECLRTLSGHTSGVTSV-SFSP--DGKRLVSGSEDGTIKVWD