Input parameters:

  Query = F13D12.7b (Len=153)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F13D12.7b, Len=153):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHD 80  
WD40-rpts      (__________WD 1_________)   (_________________WD 2________________)(____________

Query       81 NIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 153 
WD40-rpts      _______WD 3___________________)   (_________________WD 4________________)

4 WD40-repeats found in QUERY=F13D12.7b (Len=153):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-25       5.19  328.84  0.00230       27.5%     34.52
  WD 2:  Seg  4    29-67      10.53  549.80  2.4e-06       37.5%     54.54
  WD 3:  Seg  8    68-111      8.72  474.91  2.5e-05       32.5%     57.66
  WD 4:  Seg 12   115-153      9.94  525.21  5.2e-06       30.0%     50.07

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-25     -------------------MSLSLSPDFRTFISGACDASAKLWD
   WD 2   29-67     -GM----CKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFD
   WD 3   68-111    IRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWD
   WD 4  115-153    -QE----RAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD