Input parameters:

  Query = F32E10.1 (Len=754)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F32E10.1, Len=754):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEVSTVNDVKIYNLSAGKSLPEWMSSRTRRKLEQRNTDVRQRIQLIQDFEMPDVSNTVNITPDGKYVWASGNYKPWLRCY 80  
WD40-rpts                                                 (________________WD 1________________

Query       81 DLNNLSLKFERGLDADVIKLIPLSDDYSKVVILEEERWIEMHAMLGRYFRMRMPCQGRDMALSEESSDLYLVGSKSEVYR 160 
WD40-rpts      )(__________________WD 2__________________)                                     

Query      161 FNLEQGCWLTPFESTAPLNCVQVCTEHQLICCGTTNGVVEAWDHRDKSLCGTLDAGSSVNSHIGENQKVAVTSVAFSDPL 240 
WD40-rpts        (__________________WD 3_________________)   (______________________WD 4_______

Query      241 HIGVGTSTGQILIYDLRARRPLLIKDHNNELPINKLDFIKRDDGDVVASMDSRMMKLWHEEDGSPMAAIENTCPLNDFCR 320 
WD40-rpts      ______________)                                                                 

Query      321 FPNSGMFFFANEAPKMLQYFIPQLGPAPKWCSYLENLTEEMEETETTVYDNYRFVTKKQLDDLGLSGLIGTNVLRAYMHG 400 
WD40-rpts                                                                                      

Query      401 YFIDARLYNKAQTQMQPFAYEKYKDEKIKSMIADEREESAVKKKVEKLPAVNKALAARLRDEASAANQKAETKKEKKKSK 480 
WD40-rpts                                                                                      

Query      481 KSDAATSLLADDRFKKLFESEDFEVDETSEQFLKNASIAQKMKAKGPVEVESEGEESEDNDASDSENEASGSDSEPKGSA 560 
WD40-rpts                                                                                      

Query      561 SWMVEENREVDMASDLESASSDEDIDQSLKAKRAKVRAAKKSERNIQKSQKYDERKEAKKIRKEQRQLSKPSKFVLHSIG 640 
WD40-rpts                                                                                      

Query      641 TGETTRKFVDETVAVRDDADNKDSMALGARKRATARSDRKTKKVNDDDVPFGGREMTFTISKRDKDLRAEAAKTKQAAHA 720 
WD40-rpts                                                                                      

Query      721 AERKEVSRRPNALVTKGLKKLPGNVNVGKRQNTF 754 
WD40-rpts                                        

4 WD40-repeats found in QUERY=F32E10.1 (Len=754):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    44-81       2.98  237.58  0.03843       22.5%     39.98
  WD 2:  Seg  5    82-123      3.51  259.71  0.01952       12.5%     43.24
  WD 3:  Seg 13   163-203      5.24  331.32  0.00213       20.0%     40.22
  WD 4:  Seg 16   207-255      3.02  239.27  0.03650       35.0%     42.47

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   44-81     ----QLIQDFEMPD-----------V--SNTVNITPDGKYVWASGNYKPWLRCYD
   WD 2   82-123    LNN-LSLKFERGLD-----------ADVIKLIPLSDDYSKV-VILEEERWIEMHA
   WD 3  163-203    LEQGCWLTPFESTA-----------P--LNCVQVCTEHQLI-CCGTTNGVVEAWD
   WD 4  207-255    -KS-LCGTLDAGSSVNSHIGENQKVA--VTSVAFS-DPLHI-GVGTSTGQILIYD

   WD40 Template    TGE-CLRTLSGHTS-----------G--VTSVSFSPDGKRL-VSGSEDGTIKVWD