Input parameters:

  Query = Y102E9.2a (Len=388)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y102E9.2a, Len=388):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFITAFRERVFIASGDLIRTFRISEETELKNFISWSKINPERIQKPSFDIEKELKAVEKRVILCLAHSNVLTTHGRRLV 80  
WD40-rpts                     (___________________WD 1___________________)                     

Query       81 AVGTNEKQIHVFEYFVNDKGDIVTAEHIVTSVVPKAPTAIVFDKEDAYVVVGDRAGDVHRFSVLNGSAIEMAGAISMILD 160 
WD40-rpts                   (______________________WD 2_____________________)     (____________

Query      161 VAFSPDGKRLLMADRDEKVRALRYPATSVIDSFFLGHTEYVKTLAVQDNDSLWSSGGDKNLYNWSIAKCSAPRRTLDLSQ 240 
WD40-rpts      ___WD 3_______________)     (________________WD 4_______________)(______________

Query      241 FDAPIRKISINLQHKKIAVIFEKIETVVIVDLNQESLQTTSVSIVGESQCLDIASTKDYFAVLGRSTVHLIDLNNMEQKF 320 
WD40-rpts      ______WD 5____________________) (___________________WD 6__________________)(____

Query      321 VPIDEELTITLTSTNDAIDNLFKNVTHNNQQEYEKRKADKFEQIEKKKRRLNEDINGDDGEGPGPSNS 388 
WD40-rpts      ____________WD 7________________)                                   

7 WD40-repeats found in QUERY=Y102E9.2a (Len=388):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    16-59       5.60  345.96  0.00135        7.5%     27.32
  WD 2:  Seg  8    94-142      6.77  394.35  0.00030       15.0%     42.31
  WD 3:  Seg 12   148-183      8.74  475.58  2.4e-05       30.0%     45.30
  WD 4:  Seg 15   189-225      6.60  387.11  0.00038       20.0%     46.77
  WD 5:  Seg 18   226-271      6.48  382.13  0.00044       17.5%     44.07
  WD 6:  Seg 21   273-315      5.39  337.36  0.00177       20.0%     25.82
  WD 7:  Seg 25   316-353      3.50  259.21  0.01983        2.5%     39.35

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   16-59     GDLI-RTFRIS---------EET---ELKNFISWSKINPERIQKP-SFDIEKELKAVE
   WD 2   94-142    YFVN-----DKGDIVTAEHIVTS---VVPKAPTAIVFDKEDAYVV-VGDRAGDVHRFS
   WD 3  148-183    ---------AI---------EMA---GAISMILDVAFSPDGKRLL-MADRDEKVRALR
   WD 4  189-225    --VI-----DS---------FFL---GHTEYVKTLAVQDND-SLW-SSGGDKNLYNWS
   WD 5  226-271    IAKCSAPRRTL---------DLS---QFDAPIRKISINLQHKKIAVIFEKIETVVIVD
   WD 6  273-315    NQES-----LQ---------TTSVSIVGESQCLDIASTKDYFAVL-GRSTVHLIDLNN
   WD 7  316-353    MEQ-------K---------FVP---IDEELTITLTSTNDAIDNL-FKNVTHNNQQEY

   WD40 Template    TGEC-----LR---------TLS---GHTSGVTSVSFSPDGKRLV-SGSEDGTIKVWD