Input parameters:

  Query = Y102E9.2b (Len=391)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (Y102E9.2b, Len=391):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFITAFRERVFIASGDLIRTFRISEETELKNFISWSKINPERIQKPSFDIEKELKAVEKRVILCLAHSNVLTTHGRRLV 80  
WD40-rpts      (__________WD 1__________)                  (______________________WD 2_________

Query       81 AVGTNEKQIHVFEYFVNDKGDIVTAEHIVTSVVPKAPTAIVFDKEDAYVVVGDRAGDVHRFSVLNGSAIEMAGAISMILD 160 
WD40-rpts      ____________)  (_____________________WD 3____________________)  (_______________

Query      161 VAFSPDGKRLLMADRDEKVRALRYPACSQTSVIDSFFLGHTEYVKTLAVQDNDSLWSSGGDKNLYNWSIAKCSAPRRTLD 240 
WD40-rpts      __WD 4________________)       (________________WD 5________________)(___________

Query      241 LSQFDAPIRKISINLQHKKIAVIFEKIETVVIVDLNQESLQTTSVSIVGESQCLDIASTKDYFAVLGRSTVHLIDLNNME 320 
WD40-rpts      _________WD 6____________________)                                  (___________

Query      321 QKFVPIDEELTITLTSTNDAIDNLFKNVTHNNQQEYEKRKADKFEQIEKKKRRLNEDINGDDGEGPGPSNS 391 
WD40-rpts      __________WD 7_____________________)                                   

7 WD40-repeats found in QUERY=Y102E9.2b (Len=391):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-26       4.27  290.96  0.00744        7.5%     26.37
  WD 2:  Seg  5    45-93       6.22  371.55  0.00061       10.0%     45.65
  WD 3:  Seg  8    96-142      7.77  435.56  8.4e-05       12.5%     45.26
  WD 4:  Seg 12   145-183      9.12  491.43  1.5e-05       30.0%     48.65
  WD 5:  Seg 16   191-228      6.64  388.89  0.00036       20.0%     47.26
  WD 6:  Seg 20   229-274      6.41  379.34  0.00048       17.5%     43.67
  WD 7:  Seg 26   309-356      4.25  290.19  0.00762        5.0%     41.36

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-26     -------------------------------------------MSFITAFRERVFIA-SGDLIRTFRISE
   WD 2   45-93     QKPSFDIEKELKA-----V--------EKRVIL-------CLAHSNVLTTHGRRLVA-VGTNEKQIHVFE
   WD 3   96-142    VN---------DK-----G--------DIVTAEHIVTSVVPKAPTAIVFDKEDAYVV-VGDRAGDVHRFS
   WD 4  145-183    -N---------GS-----A--------IEMAGA-------ISMILDVAFSPDGKRLL-MADRDEKVRALR
   WD 5  191-228    -S---------VI-----D--------SFFLGH-------TEYVKTLAVQDND-SLW-SSGGDKNLYNWS
   WD 6  229-274    IA---------KCSAPRRT--------LDLSQF-------DAPIRKISINLQHKKIAVIFEKIETVVIVD
   WD 7  309-356    ST---------VH-----LIDLNNMEQKFVPID-------EELTITLTSTNDAIDNL-FKNVTHNNQQEY

   WD40 Template    TG---------EC-----L--------RTLSGH-------TSGVTSVSFSPDGKRLV-SGSEDGTIKVWD