Input parameters:

  Query = FBpp0070299 (Len=506)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0070299, Len=506):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEDAVEALFISTSSEDNTTCSVQDLRTGTDLMRYKGGGCAQHHSLNMIHLNYVMAANSAKPLLHVWPINKQEQMAGLRFV 80  
WD40-rpts                                  (_________________WD 1________________)   (_________

Query       81 VPGKVNALALTPDGNFLVAGIQENIYLWHMSSGRMLNTLSKHYQAITCLRFTDNGEHFISGGKDGAVLVWDLTFSAAPLD 160 
WD40-rpts      ________WD 2________________)   (_________________WD 3________________)         

Query      161 TGGGKDSTEPLYSFNDHGLAVTDLYSGIGGIRSYLYTVSLDRCCKVYDLCGGVLLLSVVFPVALHSVIVSKMETRVYVGS 240 
WD40-rpts             (__________________WD 4_________________)  (_________________WD 5________

Query      241 SDGKVFVFNMENAPRMKEYHLEGEEIQAFVGHTYGKAITCLALNISATTLVSGGEDNQVCVWDVGSRQLIKSLSQKGSVT 320 
WD40-rpts      ________)             (__________________WD 6_________________)         (_______

Query      321 NLHIRLLSPAIFLPEHKQPQMFADSLKRMISPWDENDCIELFDPDYSGGRKTPELDYTQSHPGTDEEIILKLIASMSSGK 400 
WD40-rpts      ___________WD 7__________________)                                              

Query      401 NEDDEGIEAETKATDVEDSEVEEEEPESEPMETASKEAESEKSYAEYQPDSAQTSDERVQELQAENARLKAQSMRLFQIA 480 
WD40-rpts                                                                                      

Query      481 FKYITSDTNGQAEITEKTKRKKARKT 506 
WD40-rpts                                

7 WD40-repeats found in QUERY=FBpp0070299 (Len=506):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    29-67       7.06  406.45  0.00021       15.0%     52.89
  WD 2:  Seg  7    71-109      6.14  368.44  0.00067       30.0%     56.52
  WD 3:  Seg 11   113-151     10.56  550.67  2.4e-06       40.0%     54.45
  WD 4:  Seg 15   168-208      6.64  389.06  0.00036       30.0%     53.61
  WD 5:  Seg 19   211-249      7.64  430.28  9.9e-05       27.5%     56.69
  WD 6:  Seg 23   263-303      8.28  456.75  4.3e-05       40.0%     55.76
  WD 7:  Seg 28   313-354      7.52  425.10  0.00012       20.0%     32.35

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   29-67     -TDLMRYKGGGCAQ--HHSLNMIHLN--Y--VMAANSAKPLLHVWP
   WD 2   71-109    -QEQMAGLRFVVPG-KVNALALTPDG--N--FLVAGI-QENIYLWH
   WD 3  113-151    -GRMLNTLSKHYQA--ITCLRFTDNG--E--HFISGGKDGAVLVWD
   WD 4  168-208    -TEPLYSFNDHGLA--VTDLYSGIGGIRS--YLYTVSLDRCCKVYD
   WD 5  211-249    -GGVLLLSVVFPVA--LHSVIVSKME--T--RVYVGSSDGKVFVFN
   WD 6  263-303    -GEEIQAFVGHTYGKAITCLALNISA--T--TLVSGGEDNQVCVWD
   WD 7  313-354    LSQKGSVTNLHIRL--LSPAIFLPEH--KQPQMFADSLKRMISPWD

   WD40 Template    TGECLRTLSGHTSG--VTSVSFSPDG--K--RLVSGSEDGTIKVWD