Input parameters:

  Query = FBpp0070422 (Len=361)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0070422, Len=361):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVPIGAVHGGHPGVVHPPQQPLPTAPSGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKF 80  
WD40-rpts                       (__________________WD 1_________________)   (_________________W

Query       81 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVF 160 
WD40-rpts      D 2________________)   (_________________WD 3________________)   (______________

Query      161 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 240 
WD40-rpts      ___WD 4________________)   (_________________WD 5________________)   (__________

Query      241 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEV 320 
WD40-rpts      _______WD 6_________________)   (__________________WD 7__________________)   (__

Query      321 VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361 
WD40-rpts      ________________WD 8_________________)   

8 WD40-repeats found in QUERY=FBpp0070422 (Len=361):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    18-58       4.96  319.74  0.00305       12.5%     30.94
  WD 2:  Seg  4    62-100     10.08  530.94  4.3e-06       45.0%     55.41
  WD 3:  Seg  8   104-142     10.95  566.87  1.4e-06       47.5%     57.47
  WD 4:  Seg 12   146-184     10.61  553.01  2.2e-06       40.0%     56.08
  WD 5:  Seg 16   188-226     10.88  563.90  1.6e-06       45.0%     55.90
  WD 6:  Seg 20   230-269      9.45  505.14  9.7e-06       42.5%     54.65
  WD 7:  Seg 24   273-314      8.83  479.61  2.1e-05       37.5%     57.12
  WD 8:  Seg 28   318-358      8.34  459.29  4.0e-05       32.5%     52.63

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-58     PQQPLPTA-PSGPNSLQPNSVG--QPGATTSSNSS--ASNKSSLSV
   WD 2   62-100    -YTLKFTL-AGHTKAVSAVKFS---PNGEWLASSS--ADKLIKIWG
   WD 3  104-142    -GKFEKTI-SGHKLGISDVAWS---SDSRLLVSGS--DDKTLKVWE
   WD 4  146-184    -GKSLKTL-KGHSNYVFCCNFN---PQSNLIVSGS--FDESVRIWD
   WD 5  188-226    -GKCLKTL-PAHSDPVSAVHFN---RDGSLIVSSS--YDGLCRIWD
   WD 6  230-269    -GQCLKTLIDDDNPPVSFVKFS---PNGKYILAAT--LDNTLKLWD
   WD 7  273-314    -GKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGS--EDNMVYIWN
   WD 8  318-358    -KEVVQKL-QGHTDTVLCTACH---PTENIIASAALENDKTIKLWK

   WD40 Template    TGECLRTL-SGHTSGVTSVSFS---PDGKRLVSGS--EDGTIKVWD