Input parameters:

  Query = FBpp0070949 (Len=356)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0070949, Len=356):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFTTLHSEDTEYSADSVEWLTHDDAATGFFACGTYQLVQEEDEPAAETSAKRPRKGRVYLYQFEEENCRLERLQCIETSA 80  
WD40-rpts      (_________________WD 1________________)                        (________________

Query       81 ILDMKWLPAWSSECNPHLATVNSLGQMELYEFLQDAKLLQRRTCFSLAEQDSSEEAPLALALDWQHDGQHIRLAISDSKG 160 
WD40-rpts      _____WD 2_____________________)               (_________________WD 3____________

Query      161 GLNLLSYSSQGEIIRERSWLSHGFEAWTCAFDRWSPHILYSGGDDMLLMAHDLRTKQRAWTNRAHMAGVTCLLSHPRHEN 240 
WD40-rpts      _____)(____________________WD 4____________________)   (_________________WD 5___

Query      241 HLLTGSYDEQLRLFDTRSMKRSLAELDLSGGIWRLKPHPAQPDLILAACMYTNFSVVQLDVAAPGLSLLGAYEEHKSICY 320 
WD40-rpts      ______________)   (__________________WD 6__________________)(___________________

Query      321 GADWAPWRNKDDASLTMATCSFYDHTLCVSRVDINK 356 
WD40-rpts      ____WD 7______________________)     

7 WD40-repeats found in QUERY=FBpp0070949 (Len=356):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       2.87  233.23  0.04387       15.0%     13.30
  WD 2:  Seg  5    64-111      3.79  271.08  0.01375       17.5%     50.98
  WD 3:  Seg 10   127-166      5.38  337.03  0.00179       17.5%     44.10
  WD 4:  Seg 13   167-212      5.63  347.19  0.00130       20.0%     49.68
  WD 5:  Seg 17   216-255      7.24  413.73  0.00017       27.5%     50.05
  WD 6:  Seg 21   259-300      3.43  256.41  0.02160       10.0%     40.38
  WD 7:  Seg 25   301-351      4.07  282.95  0.00953       20.0%     53.57

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     MF----T-----TLHSEDTEYS-ADSVEWLT------HDD--AAT---GFF-ACGTYQLVQ
   WD 2   64-111    EE----E--NCRLERLQCIETSAILDMKWLP-AWSSECNP--HLA---TVN-SLGQMELYE
   WD 3  127-166    LA----E-------QDSSEEAPLALALDWQH------DGQHIRLA---ISD-SKGGLNLLS
   WD 4  167-212    YS----SQGEIIRERSWLSHGFEAWTCAFDR-----WSPH--ILY---SGG-DDMLLMAHD
   WD 5  216-255    -K----Q-----RAWTNRAHMAGVTCLLSHP-----RHEN--HLL---TGS-YDEQLRLFD
   WD 6  259-300    -M----K-----RSLAELDLSGGIWRLKPHP------AQP--DLILAACMY-TNFSVVQLD
   WD 7  301-351    VAAPGLS-----LLGAYEEHKSICYGADWAPWRNKDDASL--TMA---TCSFYDHTLCVSR

   WD40 Template    TG----E-----CLRTLSGHTSGVTSVSFSP------DGK--RLV---SGS-EDGTIKVWD