Input parameters:

  Query = FBpp0071137 (Len=358)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0071137, Len=358):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSEAAVPASNANANATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSP 80  
WD40-rpts                                                                 (_________________WD 

Query       81 DKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSY 160 
WD40-rpts      1________________)   (_________________WD 2________________)       (____________

Query      161 MSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF 240 
WD40-rpts      _____WD 3________________)   (__________________WD 4_________________)   (______

Query      241 EGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKS 320 
WD40-rpts      ___________WD 5________________)   (__________________WD 6_________________)   (

Query      321 ERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVWA 358 
WD40-rpts      _________________WD 7________________)

7 WD40-repeats found in QUERY=FBpp0071137 (Len=358):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    60-98       9.17  493.40  1.4e-05       32.5%     54.03
  WD 2:  Seg  6   102-140      8.73  475.11  2.5e-05       15.0%     56.95
  WD 3:  Seg 10   148-186      9.01  486.85  1.7e-05       27.5%     42.98
  WD 4:  Seg 13   190-230      8.94  483.96  1.9e-05       35.0%     53.95
  WD 5:  Seg 17   234-272     10.21  536.30  3.7e-06       35.0%     52.53
  WD 6:  Seg 21   276-316      8.27  456.27  4.4e-05       32.5%     56.79
  WD 7:  Seg 25   320-358      9.91  524.12  5.4e-06       45.0%     51.27

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   60-98     IKPRKVLKGHQ--AKVLCTDWSPD--KRHIISSSQDGRLIIWD
   WD 2  102-140    TNKEHAVTMPT--TWIMACAYAPS--GNFVACGGLDNKVTVYP
   WD 3  148-186    AAKKRTVGTHT--SYMSCCIYPNS--DQQILTGSGDSTCALWD
   WD 4  190-230    GQLLQSFHGHS--GDVMAIDLAPNETGNTFVSGSCDRMAFIWD
   WD 5  234-272    GHVVQSFEGHQ--SDVNSVKFHPC--GDAIATGSDDSSCRLYD
   WD 6  276-316    DREVAVFAKESIIFGVNSVDFSVS--GRLLFAGYNDYTVNLWD
   WD 7  320-358    SERVCLLYGHE--NKVSCVQVSPD--GTALSTGSWDYTIRVWA

   WD40 Template    GECLRTLSGHT--SGVTSVSFSPD--GKRLVSGSEDGTIKVWD