Input parameters:

  Query = FBpp0072023 (Len=328)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0072023, Len=328):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAANNLRQIPLTCSGHTRPVVHLDFSDICDAGYFLISACKDGSPMLRHGDTGDWVGTFEGHKGAVWNATLNRNATLAASG 80  
WD40-rpts           (___________________WD 1__________________)   (_________________WD 2_______

Query       81 AADFTGKVWNAVTGAEIHSFQHKHIVKSVAFDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKC 160 
WD40-rpts      _________)   (________________WD 3________________)(___________________WD 4_____

Query      161 IISAAEDKTVRLWDRMTGIEVQRLQFNSNPNSLEISSDNHILTISHGSSISFWEIDTLKKLKEVKVPTNVASASLHPDKH 240 
WD40-rpts      _____________)   (________________WD 5_______________)   (________________WD 6__

Query      241 VFVCGGEDFKMYKFDYITGNEIESFKGHFGPVHSVKFSPDGELYASGSEDGTLRLWQTTVGKTYGLWKCTEPADLGNSIS 320 
WD40-rpts      ______________)   (_________________WD 7________________)                       

Query      321 SPREVQAN 328 
WD40-rpts              

7 WD40-repeats found in QUERY=FBpp0072023 (Len=328):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-48       8.06  447.41  5.8e-05       32.5%     54.54
  WD 2:  Seg  5    52-90       9.59  510.98  8.1e-06       30.0%     54.17
  WD 3:  Seg  9    94-131      8.02  446.00  6.1e-05       27.5%     56.45
  WD 4:  Seg 13   132-174      9.19  494.22  1.4e-05       27.5%     52.24
  WD 5:  Seg 17   178-214      5.83  355.29  0.00101       22.5%     54.29
  WD 6:  Seg 21   218-255      7.70  432.82  9.1e-05       30.0%     53.89
  WD 7:  Seg 25   259-297     10.73  557.87  1.9e-06       47.5%     54.25

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-48     LRQ---IPLTCSGHTRPVVHLDFSDICDAGYFLISACKDGSPMLRH
   WD 2   52-90     -GD---WVGTFEGHKGAVWNATLNR---NATLAASGAADFTGKVWN
   WD 3   94-131    -GA---EIHSF-QHKHIVKSVAFDR---DSENIVTGSNEKLVRVFN
   WD 4  132-174    LEQPEAQPEEYAGHTGAIKRALFCR---GDKCIISAAEDKTVRLWD
   WD 5  178-214    -GI---EVQRLQFN-SNPNSLEISS---DNH-ILTISHGSSISFWE
   WD 6  218-255    -LK---KLKEVKVPTN-VASASLHP---DKHVFVCGGEDFKMYKFD
   WD 7  259-297    -GN---EIESFKGHFGPVHSVKFSP---DGELYASGSEDGTLRLWQ

   WD40 Template    TGE---CLRTLSGHTSGVTSVSFSP---DGKRLVSGSEDGTIKVWD