Input parameters:

  Query = FBpp0072033 (Len=655)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0072033, Len=655):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQRGKISFGKIKLNVNVPPAEPRSNETEAEDAKESTEASGNGGGFKKMDKEQMIRQIEDVAEDLESQHLKEVMGISGFGR 80  
WD40-rpts                                                                                      

Query       81 KAAKVFDINEQIEKARVTRPGMDKKREESKPKEDDQKDEEEEDVIGPLPPAVTTDKEKATKESSKDEDSDDDDYSSDEDS 160 
WD40-rpts                                                                                      

Query      161 DDEQSLAKRIPYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCFWDFAGMDSSMRSFRQLQPCENHPIRSLQYSVT 240 
WD40-rpts                 (_________________WD 1________________)            (_______________WD

Query      241 GDMILVISGNAQAKVLDRDGFEKLECCKGDQYISDMSRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQL 320 
WD40-rpts       2______________)          (____________________WD 3___________________)        

Query      321 QVIKTRAQGGLRTNAASCNFNRDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAHQKGSEITSIVFSYMGQQLATRSND 400 
WD40-rpts          (_______________WD 4_______________)        (_________________WD 5__________

Query      401 ETMKLWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLW 480 
WD40-rpts      ______)    (_____________________WD 6____________________)   (_________________W

Query      481 HPKLNQLFVSCGNGTIKCYYDEHRSIRGAKLCVVKTHRKRQPMEMVGVSQIITPHALPLFRQEKSRTSRKRMEKARMDPV 560 
WD40-rpts      D 7________________)                                                            

Query      561 KSQRPDLPITSGQGGRVASSGGTLSSYVIRNLGLSKRVDDDQDPREAILKYAKDAAENPYWIAPAYKQTQPKAIFSEKLP 640 
WD40-rpts                                                                                      

Query      641 ADEPATKKPKTEADK 655 
WD40-rpts                     

7 WD40-repeats found in QUERY=FBpp0072033 (Len=655):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   172-210      8.61  470.39  2.8e-05       30.0%     50.19
  WD 2:  Seg  7   223-257      6.26  373.40  0.00058       17.5%     49.35
  WD 3:  Seg 11   268-312      7.93  442.38  6.8e-05       25.0%     44.98
  WD 4:  Seg 15   325-360      8.18  452.60  4.9e-05       30.0%     43.31
  WD 5:  Seg 18   369-407      9.28  498.15  1.2e-05       37.5%     49.66
  WD 6:  Seg 22   412-458      4.97  319.79  0.00305       27.5%     53.46
  WD 7:  Seg 26   462-500      7.73  434.00  8.8e-05       20.0%     56.94

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  172-210    -Y----THEVQMQHGSR--AVLALAGDP-SGARLVSGSI------DYDMCFWD
   WD 2  223-257    ---------QLQPCENH--PIRSLQYSV-TGDMILVISG------NAQAKVLD
   WD 3  268-312    KGDQYISDMSRTKGHVA--QLTSGCWHPFNREQFLTAAL------DGTLRIWQ
   WD 4  325-360    T--------RAQGGLRT--NAASCNFNR-DATLIAAGCV------DGSIQTWD
   WD 5  369-407    -T----HCVRDAHQKGS--EITSIVFSY-MGQQLATRSN------DETMKLWD
   WD 6  412-458    -K----QPLHTWTNLFSRYDTTDCCFSP-DDRLLVTGESLPKGQAEANLYFYS
   WD 7  462-500    -Y----EEVQRIPVSNA--HVVKTLWHP-KLNQLFVSCG------NGTIKCYY

   WD40 Template    TG----ECLRTLSGHTS--GVTSVSFSP-DGKRLVSGSE------DGTIKVWD