Input parameters:

  Query = FBpp0072055 (Len=451)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0072055, Len=451):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFQSEYQQRLLPGVAVGKKEDIDLRCIPTRAGNHWNRNFVNAPGDSNVYESSVYSCLLRNEFLDENITSLENCEQTAQVH 80  
WD40-rpts                                                                                      

Query       81 AQTDDFRDRHNRIFGFASGSSSPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNLIDWSSKNTLA 160 
WD40-rpts                 (_________________WD 1________________)                              

Query      161 VGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGTQSGYVTIWDAENQKQINRLEEHSARVTALAWCGN 240 
WD40-rpts                 (___________________WD 2___________________)   (________________WD 3_

Query      241 RLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVWTDDWPEPIYAFDEHKAVVKALG 320 
WD40-rpts      ______________)     (_________________WD 4________________)   (_________________

Query      321 WSPHKSGLLASGGGSADRCLRFWNVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGH 400 
WD40-rpts      _WD 5__________________)   (_________________WD 6_________________)   (_________

Query      401 TQRVLHLSVSPDNESIVTGGADETLRFWTVFTKQKISKEPNSVLRLFKGIR 451 
WD40-rpts      ________WD 7________________)                      

7 WD40-repeats found in QUERY=FBpp0072055 (Len=451):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    92-130      2.83  231.52  0.04621       12.5%      7.48
  WD 2:  Seg  5   172-215      8.05  447.00  5.9e-05       22.5%     57.58
  WD 3:  Seg  9   219-255      6.88  398.82  0.00026       32.5%     53.23
  WD 4:  Seg 13   261-299      8.96  484.84  1.8e-05       32.5%     49.71
  WD 5:  Seg 17   303-344      6.89  399.24  0.00026       25.0%     41.34
  WD 6:  Seg 21   348-387      5.17  328.13  0.00235       15.0%     49.36
  WD 7:  Seg 25   391-429      9.55  509.30  8.5e-06       37.5%     54.25

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   92-130    RIF----GFASGSSSPVRTPFANISESSQRLLS----IFKRPMRRLP
   WD 2  172-215    AVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAI---GTQSGYVTIWD
   WD 3  219-255    -QK----QINRLEEHSARVTALAWC--GNRLAS---GSRDRSILQRD
   WD 4  261-299    -TH----ITRCLRGHKLEVCGLQWSPSNRYLAS---GGSDNRLLVWT
   WD 5  303-344    -PE----PIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWN
   WD 6  348-387    -GK----LVKCINTG-AQISNLAWARDSRELVT-THGHAQPQVIAWR
   WD 7  391-429    -LK----QMARLSGHTQRVLHLSVSPDNESIVT---GGADETLRFWT

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVS---GSEDGTIKVWD