Input parameters:

  Query = FBpp0072657 (Len=748)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0072657, Len=748):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDVEDSVASGAASACKRQKRNTDSQNDGEPEDAAQIGEENTVAESQPLINFDTIVTHNNNGESDMEGKENQLQDESEQSE 80  
WD40-rpts                                                                                      

Query       81 EHLANKVGPEELPEIEQAGSSNLAHQLSPEAASTVLASDEPDASTGVIEPSDSEDYPPTSPTPIEASEAVSSPRFNPRNI 160 
WD40-rpts                          (_________________WD 1________________)                     

Query      161 PPTRSYRRISIELVGSYSDTSDSEEHELEEGTEHAEEYSDDAPEPHIAESADDSSSNDDMGPYSLSSEDETTTEVENLQD 240 
WD40-rpts                                                                                      

Query      241 EVEFNEDINPADREKVDYAVNQVMCKCKPKYTWNYDQELLQREHNIINRIDWRGGHTSASSFGQGYYGSRQVVEQMTLLS 320 
WD40-rpts                                                                                 (____

Query      321 SLNVHHGCVNSLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVI 400 
WD40-rpts      _____________WD 2________________)     (_________________WD 3_________________)(

Query      401 PPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTMMRCVYNDENERGRVRLFSIAHHPYA 480 
WD40-rpts      ____________________WD 4____________________)               (_______________WD 5

Query      481 PEFCVSGSDDILRVYDKRNLAKAIHQMAPRNLLEAQITQITCAVYNHSGSEILASYSDAGIYLFDSRNYNRGDYLHCYKG 560 
WD40-rpts      _______________)          (_________________WD 6________________)      (________

Query      561 HINSRTIKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGVVNCLEPHPWMPVLATSGLEHDVKIWTPQGP 640 
WD40-rpts      __________WD 7__________________)   (_________________WD 8_________________)    

Query      641 ERKLPEDLLKQTLQRNFRCNIVESIDLDINNFQYFIRGFLQGSGASHLRQRHTSSLGHQMRDNSSSRSNGSNASNPTSHR 720 
WD40-rpts                                                                                      

Query      721 RNSNSSDDTNDEGADADAALDTLHCRTQ 748 
WD40-rpts                                  

8 WD40-repeats found in QUERY=FBpp0072657 (Len=748):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   101-139      3.26  249.49  0.02671       17.5%     -13.89
  WD 2:  Seg  3   316-354      8.86  480.63  2.1e-05       40.0%     43.34
  WD 3:  Seg  6   360-399      7.17  410.81  0.00018       25.0%     45.35
  WD 4:  Seg  9   400-445      6.80  395.46  0.00029       25.0%     53.84
  WD 5:  Seg 14   461-496      6.72  392.25  0.00032       15.0%     42.87
  WD 6:  Seg 17   507-545      8.37  460.32  3.9e-05       15.0%     45.47
  WD 7:  Seg 20   552-593      8.18  452.44  5.0e-05       37.5%     53.94
  WD 8:  Seg 24   597-636      7.30  416.23  0.00015       17.5%     54.40

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  101-139    -SNL-----AHQLSP-EAASTVLAS---DEPDAS--TGVIEPSDSEDYPPT
   WD 2  316-354    -MTL-----LSSLNV-HHGCVNSLN---FNRAGD--LICSGSDDLTIVVWD
   WD 3  360-399    --QL-----HRFRSG-HNMNIFQTK---FIDSAGCLDIVSSSRDGQVRRSV
   WD 4  400-445    IPPSGGVIKPIRLYT-HSESVHKII---VVPHSR-HELMSAGEDAAVKHFD
   WD 5  461-496    NDE---------NER-GRVRLFSIA---HHPYAP--EFCVSGSDDILRVYD
   WD 6  507-545    -MAP-----RNLLEA-QITQITCAV---YNHSGS--EILASYSDAGIYLFD
   WD 7  552-593    -GDY-----LHCYKG-HINSRTIKGVNFFGPRSE--YIVSGSDCGNIFFWD
   WD 8  597-636    -EAI-----INYMKGDHVGVVNCLE---PHPWMP--VLATSGLEHDVKIWT

   WD40 Template    TGEC-----LRTLSG-HTSGVTSVS---FSPDGK--RLVSGSEDGTIKVWD