Input parameters:

  Query = FBpp0074717 (Len=346)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0074717, Len=346):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPKIDPETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVHFAGDSRHCVTGSLD 80  
WD40-rpts                                              (_____________________WD 1______________

Query       81 GKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDD 160 
WD40-rpts      ______)   (_________________WD 2________________)         (________________WD 3_

Query      161 GHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCY 240 
WD40-rpts      _______________)   (_________________WD 4________________)   (_________________W

Query      241 HPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENR 320 
WD40-rpts      D 5________________)   (__________________WD 6_________________)   (____________

Query      321 ITCISLCPNGMCLASTSWDQQVRLWL 346 
WD40-rpts      _____WD 7________________)

7 WD40-repeats found in QUERY=FBpp0074717 (Len=346):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    41-87       9.61  511.57  7.9e-06       40.0%     52.35
  WD 2:  Seg  6    91-129      9.22  495.68  1.3e-05       25.0%     57.24
  WD 3:  Seg 10   139-176      7.82  437.66  7.9e-05       32.5%     52.55
  WD 4:  Seg 14   180-218     10.21  536.60  3.6e-06       37.5%     53.17
  WD 5:  Seg 18   222-260      9.53  508.35  8.8e-06       32.5%     52.78
  WD 6:  Seg 22   264-304      7.84  438.32  7.7e-05       25.0%     56.73
  WD 7:  Seg 26   308-346      9.53  508.44  8.7e-06       35.0%     50.15

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   41-87     MGDVPKIRFSSKKILKG--HINKVNSVHFAGDSRHCVTGSLDGKLIIWD
   WD 2   91-129    -A-------NKVQIIPL--RSAWVMTVAFSPSGNFVACGGMDNQCTVYD
   WD 3  139-176    -A-------KMVKELMG--YEGFLSSCRFLDDGH-LITGSGDMKICHWD
   WD 4  180-218    -G-------VKTMDFNG--HAGDIAGLSLSPDMKTYITGSVDKTAKLWD
   WD 5  222-260    -E-------GHKQMFFG--HDMDVSSVCYHPSGFGFASCSEDQTARMYD
   WD 6  264-304    -D-------QQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWD
   WD 7  308-346    -Q-------RHTGTLSG--HENRITCISLCPNGMCLASTSWDQQVRLWL

   WD40 Template    TG-------ECLRTLSG--HTSGVTSVSFSPDGKRLVSGSEDGTIKVWD