Input parameters:

  Query = FBpp0074910 (Len=375)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0074910, Len=375):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDKPQLIEHLHEALNYTVYDTKWVPLSAKFVILGSKANGHGIMDIYELNQDKLVKVKSVEKKVAFKCGTFGAASLRNRHM 80  
WD40-rpts      (_____________________WD 1____________________)(____________________WD 2________

Query       81 AIGDFEGRLQVLDMEQPDLPVYNVKAHNGIINTIDAIGGTQIDCGAPEIVTGSRDGAVKVWDIRQGQAPVVDMSPPPQMG 160 
WD40-rpts      ____________)(______________________WD 3_____________________)          (_______

Query      161 DGVNNSSGRRDCWAVAFGNTYNAEERIVAAGYDNGDLKIFDLRSLSVRWEATMKNGICGLEFDRRDIPMNKLAVTTLEGG 240 
WD40-rpts      _______________WD 4_____________________)(___________________WD 5_______________

Query      241 LLVFDMRTQHPTKGFSYVEERNAGRSVGTNGVISGPKATVWVVRHLPQNRDLFLTGGGTGSIRLWQYEYPDRRVIDDSDG 320 
WD40-rpts      ____)                     (_________________WD 6_________________)          (___

Query      321 NKLGVAGALNMLSAATLSSQPVHCFDWHPDKLGLAVCGAFDQSVRVLITTKLNTF 375 
WD40-rpts      ____________________WD 7_______________________)       

7 WD40-repeats found in QUERY=FBpp0074910 (Len=375):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-47       4.29  291.94  0.00722       10.0%     44.23
  WD 2:  Seg  5    48-93       5.50  342.05  0.00153       15.0%     53.86
  WD 3:  Seg  9    94-142      7.33  417.36  0.00015       25.0%     54.45
  WD 4:  Seg 14   153-201      5.13  326.69  0.00246       12.5%     33.02
  WD 5:  Seg 17   202-245      5.15  327.19  0.00242       17.5%     53.09
  WD 6:  Seg 22   267-306      6.91  400.26  0.00025       22.5%     49.19
  WD 7:  Seg 27   317-368      5.99  362.27  0.00082       22.5%     43.13

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-47     MDK--------PQLIEHLHEALNYT---------VYDTK------W---VP---LSA-KF-VILGSKANGHGIMDIYE
   WD 2   48-93     LNQ--------DKLVKVKSVEKKVA---------FKCGT------FGAASL---RNR-HM-AI----GDFEGRLQVLD
   WD 3   94-142    MEQ--------PDLPVYNVKAHNGI---------INTIDAIGGTQI---DC---GAP-EI-VT----GSRDGAVKVWD
   WD 4  153-201    MSP-----------PPQMGDGVNNSSGRRDCWAVAFGNT------Y---NA---EER-IV-AA----GYDNGDLKIFD
   WD 5  202-245    LRS----------LSVRWEATMKNG---------ICGLE------F---DRRDIPMN-KL-AV----TTLEGGLLVFD
   WD 6  267-306    -VG-----------TNGVISGPKAT---------VWVVR------H---LP---QNRDLF-LT----GGGTGSIRLWQ
   WD 7  317-368    DSDGNKLGVAGALNMLSAATLSSQP---------VHCFD------W---HP---DKL-GLAVC----GAFDQSVRVLI

   WD40 Template    TGE-----------CLRTLSGHTSG---------VTSVS------F---SP---DGK-RL-VS----GSEDGTIKVWD