Input parameters:

  Query = FBpp0075597 (Len=391)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0075597, Len=391):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQGLFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGH 80  
WD40-rpts            (_________________WD 1_________________)   (_________________WD 2_________

Query       81 DRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVA 160 
WD40-rpts      _______)   (_________________WD 3________________)   (_________________WD 4_____

Query      161 TASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSG 240 
WD40-rpts      ___________)   (_________________WD 5________________)   (_________________WD 6_

Query      241 HFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALASSSC 320 
WD40-rpts      _______________)   (_________________WD 7________________)          (___________

Query      321 ESSGVSSKQSEGSSTSKSNDLSIRIDPRQSLAYQLSEENFQVLDSKHSTQPEKVLGHGMDFKQHSSSPRFF 391 
WD40-rpts      ______WD 8________________)                                            

8 WD40-repeats found in QUERY=FBpp0075597 (Len=391):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     7-46      10.06  530.39  4.4e-06       32.5%     52.88
  WD 2:  Seg  5    50-88       9.61  511.83  7.9e-06       27.5%     55.06
  WD 3:  Seg  9    92-130      9.20  494.69  1.3e-05       25.0%     56.41
  WD 4:  Seg 13   134-172      9.60  511.16  8.0e-06       25.0%     56.46
  WD 5:  Seg 17   176-214      9.35  500.93  1.1e-05       27.5%     55.34
  WD 6:  Seg 21   218-256      9.93  524.85  5.2e-06       37.5%     57.17
  WD 7:  Seg 25   260-298     10.22  536.84  3.6e-06       40.0%     53.77
  WD 8:  Seg 29   309-347      8.00  444.93  6.3e-05       20.0%     46.34

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    7-46     DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWN
   WD 2   50-88     -AARCIRFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWE
   WD 3   92-130    -RGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR
   WD 4  134-172    -RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYD
   WD 5  176-214    -GECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFD
   WD 6  218-256    -SQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILD
   WD 7  260-298    -GRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQ
   WD 8  309-347    -FEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRIDP

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD