Input parameters:

  Query = FBpp0075704 (Len=383)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0075704, Len=383):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDENSLIYGLELQARALTPQYGESNDVCFFIATNSLKPTNQVHLIQYEEEQGSVQSKVFEHALGEVWKLNSCPRNPRLLA 80  
WD40-rpts        (___________________WD 1___________________)  (___________________WD 2________

Query       81 SVYNVQKGAQVLTKAALFTLPENLNPDPEQLKSEYLPWEQVEVLDTEALGERVKTIEFHPNQDTLACVVDNKVAVMQRAE 160 
WD40-rpts      __________)______________WD 3_______________)(_____________WD 4_____________)   

Query      161 SSTRVVAEVPASGSSSGSAKHTQHFTSGKWSHHHQGHQFLTLQDGNLSAYDVRDTQHCAWSINDAHGQMVRDLDCNPNKQ 240 
WD40-rpts               (__________________WD 5__________________)(____________________WD 6____

Query      241 CHLVTGGDDGYLRIWDCRMPKAPVFERSDHSHWVWCVRFNTFHDQLILSSSSDCKVLLTCAGSVSSETQVQAGLDESNFS 320 
WD40-rpts      _______________)    (_________________WD 7_________________)                    

Query      321 GADAEERHKLLPDGLLQTFDQHEDSVYCAEWSNVDPWIFASLSYDGRVIISKVPKQYKYQIIF 383 
WD40-rpts                  (_________________WD 8_________________)           

8 WD40-repeats found in QUERY=FBpp0075704 (Len=383):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     3-46       3.65  265.52  0.01633        5.0%     43.93
  WD 2:  Seg  5    49-91       3.27  249.72  0.02653       10.0%     39.15
  WD 3:  Seg  8    90-125      3.45  256.98  0.02123       17.5%      8.17
  WD 4:  Seg 10   126-157      4.65  306.90  0.00454       15.0%     43.55
  WD 5:  Seg 14   170-211      6.31  375.45  0.00054       20.0%     42.49
  WD 6:  Seg 17   212-256      7.22  412.88  0.00017       25.0%     53.48
  WD 7:  Seg 21   261-300      6.52  384.18  0.00041       20.0%     52.68
  WD 8:  Seg 25   333-372      6.70  391.51  0.00033       25.0%     55.64

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    3-46     ENS----LIYGLELQARALTPQYGES-NDV-CFFIATNSLKPT-NQVHLIQ
   WD 2   49-91     EEQ-GSVQSKVFEHALGEVWKLNSCP-RNP-RLLAS----VYN-VQKGAQV
   WD 3   90-125    ---------QVLTKAALFTLPENLNP-DPE-QLKSE----YLPWEQVEVLD
   WD 4  126-157    -----------TEALGERVKTIEFHP-NQD-TLAC-----VVD-NKVAVMQ
   WD 5  170-211    PAS---GSSSGSAKHTQHFTSGKWSHHHQG-HQFLT----LQD-GNLSAYD
   WD 6  212-256    VRDTQHCAWSINDAHGQMVRDLDCNP-NKQCHLVTG----GDD-GYLRIWD
   WD 7  261-300    -KA----PVFERSDHSHWVWCVRFNTFHDQ-LILSS----SSD-CKVLLTC
   WD 8  333-372    -DG----LLQTFDQHEDSVYCAEWSNVDPW-IFASL----SYD-GRVIISK

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSP-DGK-RLVSG----SED-GTIKVWD