Input parameters:

  Query = FBpp0076295 (Len=339)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0076295, Len=339):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQTQTHTTTDRHGYSLRFSPFEANYLLLATSQLYGLAGGGSLFLLEQNSNTNSSSTDGQSLGELCRLEWSDGLFDVAWCP 80  
WD40-rpts       (____________________WD 1___________________)(________________________WD 2_____

Query       81 YAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNSI 160 
WD40-rpts      __________________)             (__________________WD 3_________________)   (___

Query      161 TTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGW 240 
WD40-rpts      ______________WD 4_________________)     (_________________WD 5_________________

Query      241 DLRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLERGESAQEVNARHTEFVCGLDWNPHRTHQLADCG 320 
WD40-rpts      )(___________________WD 6___________________)   (__________________WD 7_________

Query      321 WDSLANVYTPQCLSGDLVV 339 
WD40-rpts      ________)          

7 WD40-repeats found in QUERY=FBpp0076295 (Len=339):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-46       6.31  375.45  0.00054       12.5%     40.69
  WD 2:  Seg  5    47-99       5.55  344.00  0.00144       17.5%     55.16
  WD 3:  Seg  9   113-153      7.38  419.32  0.00014       35.0%     51.54
  WD 4:  Seg 13   157-196      8.07  447.82  5.7e-05       27.5%     55.96
  WD 5:  Seg 17   202-241      8.34  459.15  4.0e-05       35.0%     54.03
  WD 6:  Seg 21   242-285      7.18  411.13  0.00018       22.5%     54.07
  WD 7:  Seg 25   289-329      6.20  370.80  0.00063       22.5%     48.57

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-46     QTQ------------THTTTDR-HGYSLRFSPFEA--NYL-LLATSQLYGLAGGGSLFLLE
   WD 2   47-99     QNSNTNSSSTDGQSLGELCRLE-WSDGLFDVAWCP--YAADIAATAS-----GDGSLQIWC
   WD 3  113-153    -KQ------------PLICLQE-HKNEVYSLDWGEKWNYH-TLLSGS-----WDCTLKLWD
   WD 4  157-196    -QN------------SITTFVG-HNDLIYGAKFSP-LIAN-LFASVS-----TDGHLNLWN
   WD 5  202-241    -GK------------PLMSIEA-HASEALCCDWSH-FDRN-VLVTGG-----SDGLIRGWD
   WD 6  242-285    LRK---------MRTHVFELYS-GEFAVRRLACSP-HSAA-VLASAN-----YDFTTRIWN
   WD 7  289-329    -GE------------SAQEVNARHTEFVCGLDWNP--HRTHQLADCG-----WDSLANVYT

   WD40 Template    TGE------------CLRTLSG-HTSGVTSVSFSP--DGK-RLVSGS-----EDGTIKVWD