Input parameters:

  Query = FBpp0077735 (Len=488)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0077735, Len=488):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLAKKQKMQETDTEQEATPHTIQARLVSDTGEEAGPPIDLPAGITTQQLGLICNALLKNEEATPYLFFVGEDEIKKSLED 80  
WD40-rpts                                                                             (________

Query       81 TLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGH 160 
WD40-rpts      ______WD 1______________)   (_________________WD 2________________)   (_________

Query      161 KQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKL 240 
WD40-rpts      ________WD 3________________)     (___________________WD 4__________________)   

Query      241 GQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKS 320 
WD40-rpts      (________________WD 5________________)   (________________WD 6________________) 

Query      321 HLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVR 400 
WD40-rpts        (_________________WD 7________________)   (_________________WD 8______________

Query      401 LWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKD 480 
WD40-rpts      __)   (_________________WD 9________________)   (_________________WD10__________

Query      481 KVIKLWAY 488 
WD40-rpts      ______) 

10 WD40-repeats found in QUERY=FBpp0077735 (Len=488):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    72-105      3.18  246.16  0.02958       10.0%     33.64
  WD 2:  Seg  7   109-147     10.74  558.29  1.9e-06       45.0%     49.68
  WD 3:  Seg 11   151-189     10.27  538.76  3.4e-06       45.0%     53.30
  WD 4:  Seg 15   195-237      8.04  446.92  5.9e-05       32.5%     47.20
  WD 5:  Seg 18   241-278      8.88  481.51  2.0e-05       37.5%     54.81
  WD 6:  Seg 22   282-319      6.94  401.47  0.00024       27.5%     50.47
  WD 7:  Seg 26   323-361      7.98  444.31  6.4e-05       20.0%     48.31
  WD 8:  Seg 30   365-403     10.04  529.48  4.5e-06       32.5%     54.80
  WD 9:  Seg 34   407-445     10.59  552.06  2.3e-06       42.5%     56.56
  WD10:  Seg 38   449-487     10.06  530.10  4.5e-06       37.5%     49.40

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   72-105    DEIKKSLEDTLD-----LASV-----DTENVIDIVYQPQAVFKV
   WD 2  109-147    TRCTSSMPGHAEAVVSLNFSP-----DGAHLASGSGDTTVRLWD
   WD 3  151-189    ETPHFTCTGHKQWVLCVSWAP-----DGKRLASGCKAGSIIIWD
   WD 4  195-237    -QKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWD
   WD 5  241-278    GQCLMNIAGHTNAVTAVRWGG-----AG-LIYTSSKDRTVKMWR
   WD 6  282-319    GILCRTFSGHAHWVNNIALST-----DY-VLRTGPFHPVKDRSK
   WD 7  323-361    SLSTEELQESALKRYQAVCPD-----EVESLVSCSDDNTLYLWR
   WD 8  365-403    NKCVERMTGHQNVVNDVKYSP-----DVKLIASASFDKSVRLWR
   WD 9  407-445    GQYMATFRGHVQAVYTVAWSA-----DSRLIVSGSKDSTLKVWS
   WD10  449-487    KKLAQELPGHADEVFGVDWAP-----DGSRVASGGKDKVIKLWA

   WD40 Template    GECLRTLSGHTSGVTSVSFSP-----DGKRLVSGSEDGTIKVWD