Input parameters:

  Query = FBpp0077738 (Len=1503)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0077738, Len=1503):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTLYFDTKIEFLDSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSQATALCWHPEKALLAS 80  
WD40-rpts                                                          (_________________WD 1______

Query       81 GWEHGDIHVWFAGHREFASVNAPHKAAIVLLQFSEQGGRMVTADAMGLVTGWRCDGQYQFLTMFSHDLREVLLLICFRLT 160 
WD40-rpts      __________)(__________________WD 2__________________)                           

Query      161 VESEVREEMANLAKAAVAGDENALDTLTNWRPRTAARSMTHSGVRDNHCFYACTQGGVVYYINQGGACVEVMKCGSLPPI 240 
WD40-rpts                               (________________WD 3________________)(________________

Query      241 VQMLWHPRKDAVICLMEDLTVTLFLVESTGILTELDRVKMSGRGGGRQGGIAWSGNSLAIITGDFFVRIWDIERSDNYLL 320 
WD40-rpts      __WD 4__________________) (____________________WD 5___________________)         

Query      321 KMDLPSGNQPGSSMTTLSNGTMSSSNQFFSHDSSESSGVLRKTPKYGQLNGEMFTCLAYSSTGQTLCAGTSQGNVYTWKR 400 
WD40-rpts                                              (_________________WD 6________________) 

Query      401 SGSRLVGAPEDAWQLTNISSVRGAIRSCEWGYNELAKPCMLVNCLSNVFMLKEQPLLAVHTRELWAVQRSAKSVQLTHCS 480 
WD40-rpts                                                                                      

Query      481 GREAIVQSEFAVTAMALSELSLVMSNGRSISSYSLQKVEKSLDEFEEILQTVEGTTPTTESTTTPLSLKLLQTFAAECLA 560 
WD40-rpts                                                                                      

Query      561 LNLCNQNIFCLGSSDVFVYSVGGVVLHRIQASDIEGKIIGMDLSGCYLSVFTMNGYVKAYDVSRHDPKLLFPSKSGHDIF 640 
WD40-rpts                           (_________________WD 7_________________)                   

Query      641 DDFGEFILVKCNSSGSHLAMVIASSNFTPISTLFCWDFERSNLLEYGLLEPETNAKKESSTSLPVRIFWDAEEPRLLATE 720 
WD40-rpts                                                                                      

Query      721 VKSMIQKTLPQKNSLQPSHFVQSKVVLLFYSEKGCLNVLETQSMSPGCQLLNLCVPNVIRLKINTMEEQPLQDFVDLQQC 800 
WD40-rpts                                                                                      

Query      801 NPVTRKQVLNFSLYVAEGNMDMAYRSIRSIQSKVIWTNLAKMCVHTNRLDVAKVCMGHLEQARSVRALRQAIEDDDLETE 880 
WD40-rpts                                                                                      

Query      881 AKVAVLAIELGMIEEAKDLYRRCKRFDLLNKLLQSIGHLDEAVELAEAEDRIHLKHTYYQKAQELRERGDIKGALEYFEK 960 
WD40-rpts                                                                                      

Query      961 TQNPAQNITQLLLENPGAMKRYIQTTSDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKISKADAIARQ 1040
WD40-rpts                                                                                      

Query     1041 SGDRAACYHLARHYENVGKFQEAIMFFTRAQTFSNAIRICKENDFQEELWTVASSSRQRDKAIAAAYFEECGNFKHAVEL 1120
WD40-rpts                                                                                      

Query     1121 YHRAGMLHKALEMAFESQQPEILEIIASDLAPDSDAELINRCADFFCSIEQFQKAVHLLAKTRHLERALGICSEKGVPVT 1200
WD40-rpts                                                                                      

Query     1201 EELSEMLTPEKGEFEEATRVHILVQLGEFLQQQGDYHSATKKFTQAGDKIRAMKSLLKSGNTDKIIFFANMSRQREVYIM 1280
WD40-rpts                                                                                      

Query     1281 AANYLQALDWQSDPQVLKHIVTFYTKGQAFDSLANFYAICAQIEIEEFQDYGKALTAMQEASKCLEKLSHAQHVYNNLQR 1360
WD40-rpts                                                                                      

Query     1361 TVADVKAILEIQQALREGDHQLVIGSCRSMLIKPELPPIRHAHILAMLIRALVYVKDYSEAGRALKELTVKDSTWSASGL 1440
WD40-rpts                                                                                      

Query     1441 LDRSIVHKIAQECHLEFDLIWNAGRQVTASTSGTAATGMSSTSGMTTTDDDDADDEEITEELH 1503
WD40-rpts                                                                     

7 WD40-repeats found in QUERY=FBpp0077738 (Len=1503):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    53-91       5.74  351.69  0.00113       30.0%     44.94
  WD 2:  Seg  7    92-133      6.87  398.58  0.00026       25.0%     47.99
  WD 3:  Seg 13   186-223      3.42  255.78  0.02202       10.0%     41.35
  WD 4:  Seg 16   224-265      4.43  297.79  0.00603       15.0%     53.89
  WD 5:  Seg 20   267-311      3.31  251.45  0.02516       20.0%     41.66
  WD 6:  Seg 26   361-399      4.89  316.86  0.00334       17.5%     42.02
  WD 7:  Seg 44   582-621      5.08  324.59  0.00263       17.5%     49.28

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   53-91     -Q-----RDV--TYPVHATSQATALCWHPEKALLASGWEHGDIHVWF
   WD 2   92-133    AG---HREFA--SVNAPHKAAIVLLQFSEQGGRMVTADAMGLVTGWR
   WD 3  186-223    T-------LT--NWRPRTAARSMTHSGVRDNHCFYACTQGGVVYYIN
   WD 4  224-265    QG-----GACVEVMKCGSLPPIVQMLWHPRKDAVICLMEDLTVTLFL
   WD 5  267-311    ESTGILTELD--RVKMSGRGGGRQGGIAWSGNSLAIITGDFFVRIWD
   WD 6  361-399    -R-----KTP--KYGQLNGEMFTCLAYSSTGQTLCAGTSQGNVYTWK
   WD 7  582-621    GG-----VVL--HRIQASDIEGKIIGMDLSGCYLSVFTMNGYVKAYD

   WD40 Template    TG-----ECL--RTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD