Input parameters:

  Query = FBpp0080147 (Len=377)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0080147, Len=377):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCAADRNAY 80  
WD40-rpts      (_________________WD 1________________) (___________________WD 2________________

Query       81 VWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPNNVL 160 
WD40-rpts      __)      (_________________WD 3________________)  (___________________WD 4______

Query      161 LLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEFRNSQTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADAT 240 
WD40-rpts      _____________)                             (_______________WD 5______________)  

Query      241 NGNTVIRCRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGKLVLSGKLDKSQKKESSGITAMRIFQSMDRNMRTEN 320 
WD40-rpts        (_________________WD 6________________)(_________________WD 7________________)

Query      321 TDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNVEQGGINGGMRNLQI 377 
WD40-rpts         (_________________WD 8________________)               

8 WD40-repeats found in QUERY=FBpp0080147 (Len=377):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       7.94  442.52  6.8e-05       12.5%     52.59
  WD 2:  Seg  5    41-83       8.80  478.15  2.2e-05       25.0%     52.02
  WD 3:  Seg  9    90-128      7.80  436.70  8.1e-05       22.5%     54.58
  WD 4:  Seg 13   131-174      8.82  479.04  2.2e-05       25.0%     52.59
  WD 5:  Seg 18   204-238      7.89  440.59  7.2e-05       22.5%     46.94
  WD 6:  Seg 21   243-281      4.05  281.96  0.00983       12.5%     39.06
  WD 7:  Seg 25   282-320      7.39  419.97  0.00014       15.0%     43.37
  WD 8:  Seg 29   324-362      7.06  406.45  0.00021       12.5%     33.89

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     MA---E-----TYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYS
   WD 2   41-83     EGSDWK----LADVLNQHDLRVMGIDWAKNTNRIVSCAADRNAYVWT
   WD 3   90-128    -W---K----PALVLLRINRAATCVKWSPAENKFAVGSGARLISVCY
   WD 4  131-174    SE---NDWWVSKHIKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFS
   WD 5  204-238    ------------NSQTSGGGWINSVSFSSDGNKVCWVGHDSCVSIAD
   WD 6  243-281    -N---T----VIRCRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLT
   WD 7  282-320    -A---D----GKLVLSGKLDKSQKKESSGITAMRIFQSMDRNMRTEN
   WD 8  324-362    -V---V----DSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWN

   WD40 Template    TG---E----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD