Input parameters:

  Query = FBpp0080383 (Len=308)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0080383, Len=308):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPEFENFNVKTTIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLD 80  
WD40-rpts           (_________________WD 1_________________)   (_________________WD 2__________

Query       81 KSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQVMKEARDCITTVATNENRIYA 160 
WD40-rpts      ______)   (_________________WD 3________________)(__________________WD 4________

Query      161 ASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDA 240 
WD40-rpts      __________)(_________________WD 5_________________)   (__________________WD 6___

Query      241 QIVTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATHPKRQEMLFARRRDMYVFSTDLQIEEEQL 308 
WD40-rpts      ______________)   (__________________WD 7__________________)        

7 WD40-repeats found in QUERY=FBpp0080383 (Len=308):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-45       9.26  497.06  1.2e-05       25.0%     57.67
  WD 2:  Seg  5    49-87      10.07  530.47  4.4e-06       40.0%     55.20
  WD 3:  Seg  9    91-129     10.20  536.14  3.7e-06       35.0%     55.47
  WD 4:  Seg 13   130-171      6.65  389.19  0.00035       17.5%     51.14
  WD 5:  Seg 17   172-211      8.30  457.41  4.3e-05       20.0%     54.67
  WD 6:  Seg 21   215-255      8.00  445.29  6.2e-05       27.5%     55.19
  WD 7:  Seg 25   259-300      5.99  362.20  0.00082       22.5%     54.81

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-45     NF----NVKTTI--DCKQGAVRAVR--YNVDGTY-CLSCGSDKKIKLWN
   WD 2   49-87     -G----LLLKTY--GGHADEVTDAA--GSCDSSY-IVSASLDKSIIYWD
   WD 3   91-129    -G----APVRRL--RSHAGGVRCVC--FNEDSSI-AISGGRDNAVMCWD
   WD 4  130-171    IRTRRLDPVQVM--KEARDCITTVA--TNEN--R-IYAASLDGCVRTYD
   WD 5  172-211    IR----VGELTC--DKIGEPITYLA--QTRDEQC-LVAGCQDSVVRLLD
   WD 6  215-255    -G----GLLSEY--RGHRGDDYHIECGILSNDAQ-IVTGSSDGDAFVYD
   WD 7  259-300    -G----KVLQRIRISDNGGVVHSLA--THPKRQEMLFARRRDMYVFSTD

   WD40 Template    TG----ECLRTL--SGHTSGVTSVS--FSPDGKR-LVSGSEDGTIKVWD