Input parameters:

  Query = FBpp0081350 (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0081350, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSRTEQTLEDLKSYLRSHSKIREQRSHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERDRFLKGNTYRGHTASVDQLCW 80  
WD40-rpts                       (_________________WD 1________________)(____________________WD 

Query       81 HRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINIAWSPDGKTIAVGNKEDLITFIDTRTNKIRVEEPFSFEVNE 160 
WD40-rpts      2___________________)   (________________WD 3________________)  (_______________

Query      161 ISWNNTNDLFFLTNGLGCMHILSYPSLEHQMTLKAHPANCICIEFGPTGKYFATGSADAQVSLWDANELACLRMISRLEW 240 
WD40-rpts      __WD 4________________)   (_________________WD 5________________)   (___________

Query      241 PVRTISFSHDERMIALASEDLIIDIAFTETGERVTDIHVDASTFTVAWHPKQYLLAYACDEKDNDRRRDAGNVKIYGFSE 320 
WD40-rpts      ______WD 6________________)   (_____________________WD 7____________________)   

7 WD40-repeats found in QUERY=FBpp0081350 (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    18-56       9.66  513.75  7.4e-06       37.5%     55.47
  WD 2:  Seg  5    57-101      7.69  432.25  9.3e-05       25.0%     50.35
  WD 3:  Seg  9   105-142      7.82  437.82  7.8e-05       25.0%     56.53
  WD 4:  Seg 13   145-183      7.99  444.59  6.3e-05       10.0%     52.72
  WD 5:  Seg 17   187-225      9.95  525.67  5.1e-06       32.5%     57.90
  WD 6:  Seg 21   229-267      9.30  498.96  1.2e-05       32.5%     52.30
  WD 7:  Seg 25   271-317      5.74  351.78  0.00113       20.0%     51.59

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-56     -HS----KIREQRSHMSKVHSVCWNA-DGRYLASGSFD---------KTVVVYS
   WD 2   57-101    LERDRFLKGNTYRGHTASVDQLCWHRTNPDQFATASGD---------KTVRIWD
   WD 3  105-142    -GK----CVSVTNTKGE-NINIAWSP-DGKTIAVGNKE---------DLITFID
   WD 4  145-183    -TN----KIRVEEPFSFEVNEISWNN-TNDLFFLTNGL---------GCMHILS
   WD 5  187-225    -LE----HQMTLKAHPANCICIEFGP-TGKYFATGSAD---------AQVSLWD
   WD 6  229-267    -LA----CLRMISRLEWPVRTISFSH-DERMIALASED---------LIIDIAF
   WD 7  271-317    -GE----RVTDIHVDAS-TFTVAWHP-KQYLLAYACDEKDNDRRRDAGNVKIYG

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSP-DGKRLVSGSED---------GTIKVWD