Input parameters:

  Query = FBpp0081650 (Len=331)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0081650, Len=331):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFSVLHKEENAHDSQLWACTWGRDTAASDPDDAVVEPEENPFDFDKKEARPKDFLVTGGLDDLVKVWDLQEDNTLKLRHK 80  
WD40-rpts                           (_____________________WD 1____________________)      (_____

Query       81 LKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGK 160 
WD40-rpts      ____________WD 2________________)   (_________________WD 3________________)   (_

Query      161 AEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYD 240 
WD40-rpts      ________________WD 4_________________)   (_________________WD 5________________)

Query      241 VTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSL 320 
WD40-rpts         (_________________WD 6________________)   (_________________WD 7_____________

Query      321 NIYYCPPNAIV 331 
WD40-rpts      ___)       

7 WD40-repeats found in QUERY=FBpp0081650 (Len=331):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    22-68       6.67  390.38  0.00034       20.0%     42.31
  WD 2:  Seg  6    75-113      9.68  514.45  7.2e-06       40.0%     55.33
  WD 3:  Seg 10   117-155      9.57  509.87  8.3e-06       32.5%     55.99
  WD 4:  Seg 14   159-198      8.93  483.56  1.9e-05       37.5%     55.12
  WD 5:  Seg 18   202-240     10.50  548.35  2.5e-06       40.0%     55.73
  WD 6:  Seg 22   244-282     10.87  563.54  1.6e-06       47.5%     57.90
  WD 7:  Seg 26   286-324     10.01  528.19  4.7e-06       32.5%     54.99

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   22-68     GRDTAASDPDDAVVEPEENPF-DFDKKEARPKDFLVTGGLDDLVKVWD
   WD 2   75-113    -LKLRHKLKG-------HALG-VVSVAVSSDGQTIASSSLDSTMCLWD
   WD 3  117-155    -GDKKHLLSF-------GPVD-LWTVQFSPCNKYVISGLNDGKISMYS
   WD 4  159-198    -GKAEQTLDA-------QNGKYTLSIAYSPDGKYIASGAIDGIITIFD
   WD 5  202-240    -GKVVQTLEG-------HAMP-VRSLCFSPNSQLLLTASDDGHMKLYD
   WD 6  244-282    -SDVVGTLSG-------HASW-VLCVAFSEDGKHFASSSSDNSVKIWD
   WD 7  286-324    -RKCLHTFAE-------HTDQ-VWGVRYSPGNDKVASASEDKSLNIYY

   WD40 Template    TGECLRTLSG-------HTSG-VTSVSFSPDGKRLVSGSEDGTIKVWD