Input parameters:

  Query = FBpp0081907 (Len=498)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0081907, Len=498):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHTHNNFKTPSDEDELDDLDEDMVVGVIAEIEQEVLNESDSDNDEYDLVDMGAPVPDNDGDISYEGNDSSSSDDSFDPNA 80  
WD40-rpts                                                        (__________________WD 1_______

Query       81 ADSDSDDSMLDEAGGVTAGGATSAKKRKDDDNPSGSNKQPEATFDLDEDDETDETVRAMIAAIKKPRSSPPEIKLEDFIT 160 
WD40-rpts      __________)              (_______________WD 2______________)     (______________

Query      161 DICFHPDRDIIALATIIGDVHLYEYDNEANKLLRTIEVHSKACRDVEFTEDGRFLLTCSKDKCVMVTDMETEKLKKLYET 240 
WD40-rpts      ___WD 3________________)     (_________________WD 4________________)   (________

Query      241 AHDDAINTLHVLNENLFASGDDAGTVKLWDLRTKNAIFELKELEDQITQLTTNEQSKLLLATSADGYLTTFNISARKMYV 320 
WD40-rpts      _________WD 5________________)   (_________________WD 6________________)   (____

Query      321 QSEPYEEELNCMGVYRGDSKLVVGTSKGRLYTYNWGQFGYHCDMYPGIKSPISLMIPITDRIACVAGEDGNIRACHIAPY 400 
WD40-rpts      _____________WD 7________________)   (_________________WD 8________________)   (

Query      401 RNLGVVGQHNMPIESLDVNASGELIASSSHNNDVRFWNVKYFEDFGDIKYNEKHNAYKEQRHNLPSSKCSNASDFFSDLT 480 
WD40-rpts      _________________WD 9________________)      (_________________WD10______________

Query      481 KENADGDDDPGAGPSNMA 498 
WD40-rpts      __)               

10 WD40-repeats found in QUERY=FBpp0081907 (Len=498):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    51-91       4.75  310.72  0.00404       20.0%     21.75
  WD 2:  Seg  8   106-140      3.39  254.90  0.02263       10.0%      6.87
  WD 3:  Seg 10   146-184      7.78  436.10  8.2e-05       12.5%     38.42
  WD 4:  Seg 13   190-228      9.38  502.29  1.1e-05       32.5%     56.62
  WD 5:  Seg 17   232-270      7.32  416.98  0.00015       17.5%     53.14
  WD 6:  Seg 21   274-312      8.59  469.43  2.9e-05       17.5%     56.66
  WD 7:  Seg 25   316-354      8.09  448.78  5.6e-05       10.0%     57.13
  WD 8:  Seg 29   358-396      7.17  410.91  0.00018       12.5%     50.60
  WD 9:  Seg 33   400-438      8.98  485.59  1.8e-05       17.5%     55.64
  WD10:  Seg 37   445-483      6.70  391.32  0.00033        7.5%     41.81

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   51-91     MGAPVPDNDGDISYEGNDSSSSDDSFDPN-----AADSDSDDSMLD
   WD 2  106-140    KRK-D------DDNPSGSNKQPEATFDLD----EDDETDETVRAMI
   WD 3  146-184    -PRSS------PPEIKLEDFITDICFHPDRDIIALATIIGDVHLYE
   WD 4  190-228    -NKLL------RTIEVHSKACRDVEFTEDGRFLLTCSKDKCVMVTD
   WD 5  232-270    -EKLK------KLYETAHDDAINTLHVLNENLFASGDDAGTVKLWD
   WD 6  274-312    -KNAI------FELKELEDQITQLTTNEQSKLLLATSADGYLTTFN
   WD 7  316-354    -RKMY------VQSEPYEEELNCMGVYRGDSKLVVGTSKGRLYTYN
   WD 8  358-396    -FGYH------CDMYPGIKSPISLMIPITDRIACVAGEDGNIRACH
   WD 9  400-438    -YRNL------GVVGQHNMPIESLDVNASGELIASSSHNNDVRFWN
   WD10  445-483    -FGDI------KYNEKHNAYKEQRHNLPSSKCSNASDFFSDLTKEN

   WD40 Template    TGECL------RTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD