Input parameters:

  Query = FBpp0084894 (Len=604)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0084894, Len=604):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSTEEHVWRAHVVRRLRERNRKECDNFKEIIEQNNRLIDHVAQLKADNLKISVENEQLRNAVSTGGTGSNVAIATLEKKL 80  
WD40-rpts                                                                                      

Query       81 LSQQEELTELHKRKGENSQMIVDLNQKVEQQRIIISEKEHSLVEQQTNNNRLRAEVQLLHSSLEELKKLNNTMLDEHTAL 160 
WD40-rpts                                                                                      

Query      161 QLAFSSLEEKLRGVQDENRRLLERLMQYKSKDADKLNEENESIIRKRSAKLKRDLEDAVREPSSSSNAASSPGAASLQRN 240 
WD40-rpts                                                                                      

Query      241 SSPAQFVGGLIGDEDFDEAAINGAMEAIGLDDNEYISARFTAGEIAENSRASIDTLKATGYLGQANPTKILMKFEAHENE 320 
WD40-rpts                               (_________________WD 1________________)   (____________

Query      321 SHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTL 400 
WD40-rpts      _____WD 2________________)     (_________________WD 3________________)   (______

Query      401 TGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEKQ 480 
WD40-rpts      ___________WD 4________________)   (_________________WD 5________________)      

Query      481 ADDVLMPAKITSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIW 560 
WD40-rpts      (_______________WD 6______________)   (___________________WD 7__________________

Query      561 NVNGFLEATLKGHSTAVNAVSWSPNNNMLASVGKNKRCTIYSES 604 
WD40-rpts      )  (_________________WD 8________________)  

8 WD40-repeats found in QUERY=FBpp0084894 (Len=604):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   266-304      4.82  313.59  0.00369       10.0%      5.12
  WD 2:  Seg  2   308-346      8.98  485.52  1.8e-05       25.0%     48.55
  WD 3:  Seg  6   352-390      9.56  509.64  8.4e-06       32.5%     50.52
  WD 4:  Seg 10   394-432     10.29  539.60  3.3e-06       32.5%     51.42
  WD 5:  Seg 14   436-474      9.22  495.67  1.3e-05       27.5%     53.91
  WD 6:  Seg 18   481-515      7.33  417.30  0.00015       25.0%     45.78
  WD 7:  Seg 21   519-561      8.10  449.06  5.5e-05       25.0%     54.48
  WD 8:  Seg 25   564-602      9.63  512.57  7.7e-06       30.0%     54.23

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  266-304    EAIGLDD-NEYISARF----TAGEIAENSRASIDTLKATGYLGQ
   WD 2  308-346    -TKILMKFEAHENESH----AVRWSPVERMVATGGADRKVKLWD
   WD 3  352-390    -TEPRAVLSGSSAGIN----SVDFDSTGAYILGTSNDYGARVWT
   WD 4  394-432    -NRLRHTLTGHSGKVM----AAKYVQEPIKVVTGSHDRTLKIWD
   WD 5  436-474    -IACIETKFAGSSCND----LVTTDSLGSTIISGHYDKKIRFWD
   WD 6  481-515    ADDV-----LMPAKIT----SLDLSKDCNYLICSVRDDTIKLLD
   WD 7  519-561    -NQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIWN
   WD 8  564-602    -GFLEATLKGHSTAVN----AVSWSPNNNMLASVGKNKRCTIYS

   WD40 Template    TGECLRTLSGHTSGVT----SVSFSPDGKRLVSGSEDGTIKVWD