Input parameters:

  Query = FBpp0085379 (Len=456)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0085379, Len=456):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDDGNENISMEVVEPEDAESDMSSDSGSDAEDDTAEPKAPKEVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDV 80  
WD40-rpts                                                                                      

Query       81 IPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQ 160 
WD40-rpts                                                                                  (___

Query      161 GCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLAT 240 
WD40-rpts      ___________WD 1______________)                     (_________________WD 2_______

Query      241 GDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVN 320 
WD40-rpts      __________)(_____________________WD 3____________________)       (______________

Query      321 VISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQA 400 
WD40-rpts      ___WD 4________________)      (_________________WD 5_________________)          

Query      401 VDPAQNEDVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNIFRTISV 456 
WD40-rpts                                                              

5 WD40-repeats found in QUERY=FBpp0085379 (Len=456):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   157-190      4.12  284.80  0.00901       25.0%     44.30
  WD 2:  Seg 10   212-251      6.22  371.80  0.00061       25.0%     51.35
  WD 3:  Seg 14   252-298      7.41  420.77  0.00013       40.0%     45.81
  WD 4:  Seg 18   306-344      8.24  455.13  4.6e-05       27.5%     46.73
  WD 5:  Seg 21   351-390      7.82  437.58  7.9e-05       35.0%     52.62

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  157-190    --------------VKHQGCVNRVRARR-LGN-S-VYAASWSELGRVNIWD
   WD 2  212-251    -AR------PVFTFGGHQQEGFAIDWSP-SADGV-L--ATGDCRRDIHVWT
   WD 3  252-298    PVEDGTWKVDQRPLAGHSQSVEDLQWSP-NER-SVL--ASCSVDKTIRIWD
   WD 4  306-344    -AC------MLTCEDAHQSDVNVISWNR-NEP-F-I--ASGGDDGYLHIWD
   WD 5  351-390    -KK------PIATFKHHTDHITTVEWSPAEAT-V-L--ASGGDDDQIALWD

   WD40 Template    TGE------CLRTLSGHTSGVTSVSFSP-DGK-R-L--VSGSEDGTIKVWD