Input parameters:

  Query = FBpp0291059 (Len=429)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0291059, Len=429):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVDRSDNAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQN 80  
WD40-rpts                                                                                      

Query       81 HLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKH 160 
WD40-rpts                                                  (_____________WD 1_____________)    

Query      161 PSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHL 240 
WD40-rpts               (_________________WD 2_________________)(______________________WD 3____

Query      241 LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 320 
WD40-rpts      __________________)      (_________________WD 4_________________)(______________

Query      321 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN 400 
WD40-rpts      _____WD 5___________________)(__________________________WD 6____________________

Query      401 IMQVWQMAENVYNDEEPEIPASELETNTA 429 
WD40-rpts      _____)                       

6 WD40-repeats found in QUERY=FBpp0291059 (Len=429):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   125-156      3.39  254.89  0.02264       12.5%     42.77
  WD 2:  Seg  8   170-209      6.00  362.50  0.00081       32.5%     51.64
  WD 3:  Seg 12   210-259      5.86  356.91  0.00096       25.0%     47.13
  WD 4:  Seg 15   266-305      7.33  417.54  0.00015       35.0%     53.11
  WD 5:  Seg 19   306-349      6.80  395.45  0.00029       27.5%     51.37
  WD 6:  Seg 23   350-406      5.63  347.26  0.00130       32.5%     56.15

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  125-156    ----------------------------NHEGEVNRARYMPQN-AC-V-I-ATKTPSSDVLVFD
   WD 2  170-209    -C----------------QP---DLRLRGHQKEGYGLSWNP-NLNG-Y-L-LSASDDHTICLWD
   WD 3  210-259    IN-------ATPKEHRVIDA---KNIFTGHTAVVEDVAWHL-L-HE-S-LFGSVADDQKLMIWD
   WD 4  266-305    -S----------------KP---SHTVDAHTAEVNCLSFNP-Y-SEFI-L-ATGSADKTVALWD
   WD 5  306-349    LR----------------NLKLKLHSFESHKDEIFQVQWSP-H-NE-TIL-ASSGTDRRLHVWD
   WD 6  350-406    LSKIGEEQSTEDAEDGPPEL---LFIHGGHTAKISDFSWNP-N-EPWI-I-CSVSEDNIMQVWQ

   WD40 Template    TG----------------EC---LRTLSGHTSGVTSVSFSP-D-GK-R-L-VSGSEDGTIKVWD