Input parameters:

  Query = FBpp0291685 (Len=217)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0291685, Len=217):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLAMGWDRQVTEFNDVVGREYGDPKKWPKFHTDDITCADVKLGEGVVTATYSGEIIFWKLETGQPYRRYSVMDPTRFIEL 80  
WD40-rpts                           (________________WD 1________________)   (_________________

Query       81 KLTAEEEKFIRQSKRLASRLTHSGNHSLQTGRAGRSTVLNRPEDNRDYGTDIPISVQAVLFLQTRPQTLKHGSVFISLDT 160 
WD40-rpts      WD 2_________________)                  (_____________________WD 3______________

Query      161 GFIQVYSHHQRGGYIVEFLAVHKTGDCVLTMCTDRKNRYLYTGTAFGYIKVWYIVNF 217 
WD40-rpts      ______)    (__________________WD 4__________________)    

4 WD40-repeats found in QUERY=FBpp0291685 (Len=217):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    22-59       6.96  402.37  0.00024       22.5%     39.62
  WD 2:  Seg  6    63-102      5.66  348.50  0.00125       10.0%     39.46
  WD 3:  Seg 12   121-167      4.27  291.24  0.00738       12.5%     27.68
  WD 4:  Seg 15   172-213      6.94  401.31  0.00024       22.5%     53.55

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   22-59     -GDPKKWPKF-H---TD-------DITCADVKL-GEGVVTATYSGEIIFWK
   WD 2   63-102    -GQPYRRYSVMD---PT-------RFIELKLTAEEEKFIRQSKRLASRLTH
   WD 3  121-167    RPEDNRDYGT-D---IPISVQAVLFLQTRPQTLKHGSVFISLDTGFIQVYS
   WD 4  172-213    -GGYIVEFLA-VHKTGD-------CVLTMCTDRKNRYLYTGTAFGYIKVWY

   WD40 Template    TGECLRTLSG-H---TS-------GVTSVSFSPDGKRLVSGSEDGTIKVWD