Input parameters:

  Query = ENSDARP00000002844 (Len=433)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000002844, Len=433):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSEKLPFKVADISLAEWGRKAIEIAENEMPGLMKMRELYGQSKPLKGARIAGCLHMTLQTAVLIETLTALGAEVQWSSCN 80  
WD40-rpts                                                                                      

Query       81 IFSTQDHAAAAIAKTGVPVYAWKGETDEEYVWCIEQTIYFKDGQPLNMILDDGGDLTNLVHQKYPKLLAGIKGISEETTT 160 
WD40-rpts                                                                                      

Query      161 GVHNLYKMLKSGELKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCVQALRGFGARV 240 
WD40-rpts                (__________________________________WD 1_______________________________

Query      241 IVTEIDPINALQAAMEGYEVTTMDEACKEGNIFVTTTGCEDILLGRHFEHMKDDSIVCNIGHFDCEIDMKWLNEHAAKKI 320 
WD40-rpts      ___)                                                                            

Query      321 NIKPQVDRYRMKNGRHIIVLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWKNNSKYPLGVYFLPKKLDEEVAAAHL 400 
WD40-rpts                                                                                      

Query      401 DKLGVKLTKLTEKQAKYLGLPSEGPFKPDHYRY 433 
WD40-rpts                                       

1 WD40-repeats found in QUERY=ENSDARP00000002844 (Len=433):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   171-244      3.34  252.48  0.02438       22.5%     24.77

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  171-244    SGELKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCVQALRGFGARVIVTE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKR---------------------LVSGSEDG-------------TIKVWD