Input parameters:

  Query = ENSDARP00000004327 (Len=422)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000004327, Len=422):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSQLQARFFTENKKYLVDDVPFSIPASSEVADLSGVINKLLEAKNAGHKHVEFDFLVRGQFLRTSLDKHIETENISTEEV 80  
WD40-rpts                                                                                      

Query       81 VEIEYVEKFTAPQPEECIMHDDWISSVEADSEWILTGSYDKTARIWSMEGKAVMTVAGHADVVKDVAWVKRDGLNSVLLT 160 
WD40-rpts                (________________WD 1_______________)  (__________________WD 2________

Query      161 ASLDQTVMLWEWNSERNKVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTE 240 
WD40-rpts      __________)          (_______________WD 3_______________)                       

Query      241 QMGLTRTPLMTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLSGSKVFNCISYSPLCRRLASGSTDRHV 320 
WD40-rpts           (________________WD 4________________)   (________________WD 5_____________

Query      321 RLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDKVLCADWTENGLIL 400 
WD40-rpts      ___)      (_________________WD 6_________________)(__________________WD 7_______

Query      401 SGGADNKLYTYRYAACVSDAGA 422 
WD40-rpts      ___________)          

7 WD40-repeats found in QUERY=ENSDARP00000004327 (Len=422):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7    91-127      7.00  403.95  0.00022       22.5%     38.82
  WD 2:  Seg 10   130-171      8.07  447.95  5.7e-05       27.5%     56.91
  WD 3:  Seg 15   182-217      8.84  479.68  2.1e-05       25.0%     49.04
  WD 4:  Seg 19   246-283      6.63  388.51  0.00036       45.0%     49.78
  WD 5:  Seg 23   287-324      8.24  455.22  4.6e-05       40.0%     52.40
  WD 6:  Seg 27   331-370      8.41  462.23  3.7e-05       40.0%     54.98
  WD 7:  Seg 31   371-412      6.62  387.92  0.00037       25.0%     50.98

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   91-127    -APQ---PEECIMHDDWISSV--EAD---SE-WILTGSYDKTARIWS
   WD 2  130-171    -GKA---VMTVAGHADVVKDVAWVKRDGLNS-VLLTASLDQTVMLWE
   WD 3  182-217    -------RHCCRGHAGSVDTIAVDPT---RT-KFCSGSWDKMLKIWS
   WD 4  246-283    -RTP---LMTLSGHNEAVSSVLWM-D---AD-ELCSASWDHTIRLWD
   WD 5  287-324    -GGQ---KSTLSGSKV-FNCISYSPL---CR-RLASGSTDRHVRLWD
   WD 6  331-370    -SLV---LLSLTSHNGWVTAVRWAPS---HEHQLVSGSLDNVVKLWD
   WD 7  371-412    TRSCKAPLYDLAAHEDKVLCADWTEN---GL--ILSGGADNKLYTYR

   WD40 Template    TGEC---LRTLSGHTSGVTSVSFSPD---GK-RLVSGSEDGTIKVWD