Input parameters:

  Query = ENSDARP00000004825 (Len=362)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000004825, Len=362):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIES 80  
WD40-rpts                        (_______________________________WD 1__________________________

Query       81 LSLIDAVMPDVVQTRQQVYKDKLAQQQAASASSATTAAAAKNGENTANGEENGAHTLSNHHSDMMEVDRAVEIPASKAMV 160 
WD40-rpts      ____) (________________________WD 2_______________________)               (_____

Query      161 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGS 240 
WD40-rpts      ____________WD 3________________)                 (_________________WD 4________

Query      241 YDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 320 
WD40-rpts      ________)  (_________________WD 5________________)   (________________WD 6______

Query      321 CSTDMCIHVCKLGQWLLRQVCPYLEHAERCFSQQLQRDRRYF 362 
WD40-rpts      __________)                               

6 WD40-repeats found in QUERY=ENSDARP00000004825 (Len=362):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    19-85       4.24  289.78  0.00772       12.5%     29.66
  WD 2:  Seg  5    87-139      7.35  418.10  0.00014       15.0%     38.54
  WD 3:  Seg  9   155-193      8.99  485.91  1.8e-05       32.5%     52.97
  WD 4:  Seg 14   211-249      8.49  465.25  3.3e-05       27.5%     38.87
  WD 5:  Seg 17   252-290      9.71  515.91  6.9e-06       25.0%     51.35
  WD 6:  Seg 21   294-331      7.41  420.81  0.00013       22.5%     49.03

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   19-85     SGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLID
   WD 2   87-139    VMPDVVQ-------TRQQVYKDKLAQQQA-------ASASSATTAAAAKNGENTANGEENGAHTLSN
   WD 3  155-193    -ASKAMV--------------------LR-------GHESEVFICAWNPVSDLLASGSGDSTARIWN
   WD 4  211-249    IRE-GGQ--------------------DV-------PSNKDVTSLDWNSEGTLLATGSYDGFARIWT
   WD 5  252-290    -GNLAST--------------------LG-------QHKGPIFALKWNKKGNFILSAGVDKTTIIWD
   WD 6  294-331    -GEAKQQ--------------------FP-------FHSAPALDVDWQSNNT-FASCSTDMCIHVCK

   WD40 Template    TGECLRT--------------------LS-------GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD