Input parameters:

  Query = ENSDARP00000005640 (Len=370)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000005640, Len=370):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKVHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWS 80  
WD40-rpts      (_______________WD 1_______________)(___________________WD 2___________________)

Query       81 QKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAG 160 
WD40-rpts           (_________________WD 3________________) (____________________WD 4__________

Query      161 SCDFKCRVFSAYIKEVDEKPAPTPWGSKMPFGQVMTEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTISSTPS 240 
WD40-rpts      _________)                             (______________WD 5_____________)   (____

Query      241 QLKTEFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFTSKLDIPKQSIQRNISAMERFRNMDKRATTEDRNSTLE 320 
WD40-rpts      ____________WD 6________________)                               (_______________

Query      321 TLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM 370 
WD40-rpts      ________WD 7_______________________)              

7 WD40-repeats found in QUERY=ENSDARP00000005640 (Len=370):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-36       6.92  400.49  0.00025        5.0%     39.56
  WD 2:  Seg  4    37-80       8.72  474.70  2.5e-05       22.5%     55.03
  WD 3:  Seg  8    86-124      7.33  417.42  0.00015       20.0%     54.07
  WD 4:  Seg 12   126-170      8.21  453.62  4.8e-05       25.0%     50.40
  WD 5:  Seg 17   200-232      7.83  438.28  7.7e-05       35.0%     47.75
  WD 6:  Seg 20   236-273      6.57  385.91  0.00039       15.0%     46.44
  WD 7:  Seg 26   305-356      6.46  381.63  0.00045       25.0%     51.49

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-36     -------------MSLH--------QFLLEPITCHAW----NRDRTQIAISPNNHEVHIYK
   WD 2   37-80     KSGNQWV-----KVHEL--------KEHNGHITGIDW----APKSDRIVTCGADRNAYVWS
   WD 3   86-124    -W----K-----PTLVI--------LRINRAATFVKW----SPLENKFAVGSGARLISVCY
   WD 4  126-170    ES----ENDWWVSKHIK--------KPIRSTVLSLDW----HPNNVLLAAGSCDFKCRVFS
   WD 5  200-232    ----------------G--------AGSGGWVHSVCF----SASGNRLAWVSHDSTVTVVD
   WD 6  236-273    -S----S-----TPSQL--------KTEFLALLSVTF----VSENNIVAAGH-DCCPMLFS
   WD 7  305-356    NM----D-----KRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWD

   WD40 Template    TG----E-----CLRTL--------SGHTSGVTSVSF----SPDGKRLVSGSEDGTIKVWD