Input parameters:

  Query = ENSDARP00000005989 (Len=423)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000005989, Len=423):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASFPDCVNENEIGKAKFIGELIPPVAPFDQKSGRETWTVAFAPDGSYFAWSQGHRIVRLVPWKKCLASFSVRKEDRSSG 80  
WD40-rpts                               (________________WD 1_______________)(_________________

Query       81 AGPRRLSRQNSEGSLLPGEPREHTIDCGDIVWGLAFGSSVPEKQSRCVNIEWHRFKFGQDQLLLATGLNNGRIKIWDVYT 160 
WD40-rpts      ____WD 2____________________)       (__________________WD 3_________________)   

Query      161 GKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVF 240 
WD40-rpts      (_________________WD 4_________________)    (_________________WD 5______________

Query      241 LWDMDKYTLIRKLEGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVLLELGHLFPPPSPIFAGGANDRWVRSVAF 320 
WD40-rpts      __)   (_________________WD 6________________)                (_________________W

Query      321 CHDGRHIASVTDDRLVRFWSIDEKSPQAIGPLTNGLCCAFSTDGSVLSAGSRDGSVHFWASPRSIASLQHLCRMTLRRVM 400 
WD40-rpts      D 7________________)(_________________WD 8_________________)                    

Query      401 PTQQVYTLPIPFSMQDYLAYKTL 423 
WD40-rpts                             

8 WD40-repeats found in QUERY=ENSDARP00000005989 (Len=423):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    26-62       6.44  380.55  0.00046       12.5%     47.53
  WD 2:  Seg  6    63-109      5.88  357.44  0.00095       20.0%     40.30
  WD 3:  Seg  9   117-157      7.15  410.22  0.00018       25.0%     52.76
  WD 4:  Seg 13   161-200      9.32  499.78  1.1e-05       47.5%     56.25
  WD 5:  Seg 17   205-243      9.47  505.68  9.5e-06       32.5%     54.93
  WD 6:  Seg 21   247-285     10.03  529.09  4.6e-06       40.0%     56.10
  WD 7:  Seg 26   302-340      8.23  454.81  4.6e-05       22.5%     45.37
  WD 8:  Seg 29   341-380      9.73  516.71  6.8e-06       30.0%     48.83

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   26-62     ---VAPFD-------QKSGRETW--TVAFAPDGSY-FAWSQGHRIVRLVP
   WD 2   63-109    WKKCLASFSVRKEDRSSGAGPRR--LSRQNSEGSL-LPGEPREHTIDCGD
   WD 3  117-157    -GSSVPEK-------QSRCVNIEWHRFKFGQDQLL-LATGLNNGRIKIWD
   WD 4  161-200    -GKLLLNL-------MDHTDIVR--DLTFAPDGSLVLVSASRDKTLRVWD
   WD 5  205-243    -GNMVKVL-------RGHQNWVY--CSAFSPDSSV-LCSVGAGKAVFLWD
   WD 6  247-285    -YTLIRKL-------EGHHNDVV--CCEFSPDGAL-LATASYDTRVIVWD
   WD 7  302-340    -PSPIFAG-------GANDRWVR--SVAFCHDGRH-IASVTDDRLVRFWS
   WD 8  341-380    IDEKSPQA-------IGPLTNGL--CCAFSTDGSV-LSAGSRDGSVHFWA

   WD40 Template    TGECLRTL-------SGHTSGVT--SVSFSPDGKR-LVSGSEDGTIKVWD