Input parameters:

  Query = ENSDARP00000006813 (Len=447)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000006813, Len=447):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGVGGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQREQESKNRPLSRGEYNVYSTFQSH 80  
WD40-rpts                       (_________________WD 1________________)                        

Query       81 EPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPM 160 
WD40-rpts            (________________WD 2_______________)                                     

Query      161 DLMVEASPRRIFANAHTYHINSISVNSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCN 240 
WD40-rpts           (_________________WD 3________________)            (_________________WD 4__

Query      241 VFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPV 320 
WD40-rpts      ______________)                   (________________WD 5________________)        

Query      321 ETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTGSYNNFFRMFDRNTRRDITLEASRESSKPRAMLKPRKVCTG 400 
WD40-rpts            (___________________WD 6___________________)  (_________________WD 7______

Query      401 GKRKKDEISVDSLDFNKKILHTAWHPKENVIAVAATNNLYIFQDKMN 447 
WD40-rpts      __________)                                    

7 WD40-repeats found in QUERY=ENSDARP00000006813 (Len=447):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    18-56       7.86  439.52  7.4e-05       17.5%     42.67
  WD 2:  Seg  6    87-123      4.08  283.08  0.00950       15.0%     43.61
  WD 3:  Seg 11   166-204      8.00  444.95  6.3e-05       22.5%     50.82
  WD 4:  Seg 16   217-255      6.16  369.31  0.00066       22.5%     39.83
  WD 5:  Seg 20   275-312      6.78  394.87  0.00030       25.0%     40.61
  WD 6:  Seg 24   327-370      5.40  337.81  0.00174       10.0%     43.29
  WD 7:  Seg 27   373-411      4.80  312.99  0.00376       12.5%     19.71

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   18-56     KG-AIDEDVAEAD----IISTVEFNY--SGELLATGDKGGRVVIFQ
   WD 2   87-123    LKSL-----EIEE----KINKIRWLPQQNAAHFLLSTNDKTIKLWK
   WD 3  166-204    ASPRRIFANAHTY----HINSISVNS--DYETYLS-ADDLRINLWH
   WD 4  217-255    IKP--ANMEELTE----VITAAECHP-HQCNVFVYSSSKGTIRLCD
   WD 5  275-312    -PSSRSFFSEIIS----SISDVKFSH--SGRYMMTRD-YLSVKVWD
   WD 6  327-370    EYLRSKLCSLYENDCIFDKFECCWNG--SDSAIMTGSYNNFFRMFD
   WD 7  373-411    -TRRDITLEASRE----SSKPRAMLK--PRKVCTGGKRKKDEISVD

   WD40 Template    TGECLRTLSGHTS----GVTSVSFSP--DGKRLVSGSEDGTIKVWD