Input parameters:

  Query = ENSDARP00000007602 (Len=448)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000007602, Len=448):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQETENKSQPQCRSEYNVYSTFQS 80  
WD40-rpts                        (_________________WD 1________________)                      (

Query       81 HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDASTITTLRVPVFRP 160 
WD40-rpts      ____________________WD 2___________________)                                    

Query      161 MDLMVEASPRRVFANAHTYHINSISVNSDNETYLSADDLRINLWHLEITDRSFNIVDIKPANMEDLTEVITAAEFHPHQC 240 
WD40-rpts            (_________________WD 3________________)            (_________________WD 4_

Query      241 NTFVYSSSKGTIRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRYMMTRDYLSVKIWDLNMENRP 320 
WD40-rpts      _______________)                   (________________WD 5________________)       

Query      321 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMTGSYNNFFRMLDRTQRRDVTLEASRESCKPRQVLKPRRVCA 400 
WD40-rpts                                                   (_____________________WD 6_________

Query      401 GGKRKKDEISVDSLDFNKKILHTAWHPQENIIAVATTNNLYIFQEKVN 448 
WD40-rpts      ___________)                                    

6 WD40-repeats found in QUERY=ENSDARP00000007602 (Len=448):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    19-57       7.93  442.30  6.8e-05       17.5%     38.92
  WD 2:  Seg  6    80-124      4.63  306.07  0.00466       17.5%     44.54
  WD 3:  Seg 12   167-205      7.75  434.77  8.6e-05       22.5%     49.22
  WD 4:  Seg 17   218-256      6.23  372.02  0.00060       25.0%     37.53
  WD 5:  Seg 21   276-313      6.51  383.53  0.00042       22.5%     42.04
  WD 6:  Seg 27   366-412      5.57  344.85  0.00140       12.5%     24.12

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   19-57     KG-AI-------DDD---VAEADIISTVEFNH--SGELLATGDKGGRVVIFQ
   WD 2   80-124    SHEPE-------FDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWK
   WD 3  167-205    ASPRR-------VFA---NAHTYHINSISVNS--DNETYLS-ADDLRINLWH
   WD 4  218-256    IKP---------ANM---EDLTEVITAAEFHP-HQCNTFVYSSSKGTIRLCD
   WD 5  276-313    -PSNR-------SFF---SEIISSISDVKFSH--NGRYMMTRD-YLSVKIWD
   WD 6  366-412    FFRMLDRTQRRDVTL---EASRESCKPRQVLK--PRRVCAGGKRKKDEISVD

   WD40 Template    TGECL-------RTL---SGHTSGVTSVSFSP--DGKRLVSGSEDGTIKVWD