Input parameters:

  Query = ENSDARP00000007696 (Len=499)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000007696, Len=499):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSFRRGVVRQSKFRHVFAQAWKAEHCLDDVRVSRVTWDGPLCAANPKFIAVVIEAGGGGAFLVLPLAKSGRVDQNTPTVC 80  
WD40-rpts                                                                              (_______

Query       81 GHAAPVLDVQWCPHDDNVIASASEDCTVKIWQIPDGGLMSPMSEAVVTLEGHSKRVGILAWHPSALNILLTAGCDNVLCV 160 
WD40-rpts      __________WD 1_________________)          (_________________WD 2________________

Query      161 WDVGTGELVYQLSDAHPDLIYSVSWNREGSILCTTCKDKALRVIDPRRGTVLKVREKAHEGTRPMRAVFLADGKILTTGF 240 
WD40-rpts      _)(___________________WD 3__________________)   (___________________WD 4________

Query      241 SRMSERQLALWDTRDLSEPMATQEMDTSNGVLLPFYDPDTNMVYLCGKGDCTIRYFEVTDESPYVHFLSLYSSKEPQRGA 320 
WD40-rpts      ___________)(____________________WD 5___________________)                       

Query      321 GFLSKRGVDVNKCEIARFYKLHERKVEPISMTVPRKSDLFQGDLYPDTAGLEPALLAEDWIAGQDAPPALVSLSGGYTAP 400 
WD40-rpts                                                                                      

Query      401 PSKGGTLRGRPKLLSPTNTSPTSTTAPANPVTVEMESEGLSHGRGGRDVDGGIERVKKEEDQLSDILTEVRALRALVLAQ 480 
WD40-rpts                                                                                      

Query      481 GHRIDVLERQLARIEDGEV 499 
WD40-rpts                         

5 WD40-repeats found in QUERY=ENSDARP00000007696 (Len=499):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    73-112      7.30  416.09  0.00015       35.0%     43.13
  WD 2:  Seg  7   123-162      6.84  397.13  0.00028       30.0%     53.34
  WD 3:  Seg 11   163-205      7.44  422.17  0.00013       25.0%     49.39
  WD 4:  Seg 15   209-252      3.96  278.16  0.01106       27.5%     45.72
  WD 5:  Seg 19   253-297      4.65  306.61  0.00459       22.5%     39.41

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   73-112    -DQ---NTPTVC----GHAAP--VLDVQWCPHDD-NVI-ASA---SEDCTVKIWQ
   WD 2  123-162    -SE---AVVTLE----GHSKR--VGILAWHP-SALNIL-LTA---GCDNVLCVWD
   WD 3  163-205    VGTGELVYQLSD----AHPDL--IYSVSWNR-EG-SIL-CTT---CKDKALRVID
   WD 4  209-252    -GT---VLKVRE----KAHEGTRPMRAVFLA-DG-KIL-TTGFSRMSERQLALWD
   WD 5  253-297    TRD---LSEPMATQEMDTSNG--VLLPFYDP-DT-NMVYLCG---KGDCTIRYFE

   WD40 Template    TGE---CLRTLS----GHTSG--VTSVSFSP-DG-KRL-VSG---SEDGTIKVWD