Input parameters:

  Query = ENSDARP00000007708 (Len=1391)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000007708, Len=1391):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPSSLGSSSPAAVLQEALENSSRLIDRHLQEDRCFPDLSELLNVPSHNMPSLSGVSDMDYPLQGPALISVPSLPELSSIR 80  
WD40-rpts                                                                                      

Query       81 RVPLPPELVEQFGHMQCNCMMGVFPEISRAWLTIDNDIFMWNYEDGSDVAYFDGLSETILSVGLVKPKPGIFQPHIHFLL 160 
WD40-rpts                                                                                      

Query      161 VLSTPVDVVILGLSFPKVQTGLNDSTCGAMQLLPDPLYTIPTDNTYLLAITSTDTGRIFMAGKDGCLYEVAYQAEAGWFS 240 
WD40-rpts                                                                                      

Query      241 QRCRKINHSKSSLSFLIPSLLQFSFSEDDPVVQIAVDNSRNILYTRSEKGVLQVYDLGADGQGMSRVAAISQSSIVSAAG 320 
WD40-rpts                      (_________________WD 1_________________)                        

Query      321 NIARTIDRSVFKPIVQIAVIDRSESSDCQLLAVTHAGVRLYFSTIPFAPPNAKHVSARPSILALVHVRLPPGFSASSTLQ 400 
WD40-rpts                                                                                      

Query      401 KPAKVHKALYSRGVLLMAVSQTEDSDLLWCINHDSFPFKKPLMEAQMTVNVDGHSWALCSIEDKKSPRILTPLNKDLIPV 480 
WD40-rpts                                                                                      

Query      481 TDSPLVVQQHNVPPQKFVLLSAQGSHIFHKLRPVDQLRHLLVSSAGGESEEIERFFKLHREEQACATALILACSNATCDR 560 
WD40-rpts                                                                                      

Query      561 EVSVWATRAFFRYGGEAQMRFPSALSAPSNVGPLFSSPVPGSPMPIGSPLPNPSFLATPAPGMFPPNVSTPYVPATPMSP 640 
WD40-rpts                                                                                      

Query      641 GGAPITAVSSGPEVVFSGKHNGISIYFTRILGNIWDGSLAMETPINKGTQTVMILESTASSSDLELVLMQLQDLKEFLDK 720 
WD40-rpts                                                                                      

Query      721 NSQFSPTSLGVANFSSPANLQQRLLGFMRPDGSSSQQMQQELQRKYHTEAQAYEKASLQAMQQLIHRSCQTLALWKLLCD 800 
WD40-rpts                                                                                      

Query      801 HQFSLILSEMPKEFQDQMKAVSFKDVVVCGRELSGALITALINVYIKDSASVDTLSAHLRDICPLLYSSDDSICSKANEL 880 
WD40-rpts                                                                                      

Query      881 LQSSRQIQNKLEKERTLKESLRLYQQISHNTDLPLVCSQYRQVRFYEGVMELCLTAADKKDHQRLGLHFYRNGEPEEDTS 960 
WD40-rpts                                                                                      

Query      961 GQQAFQERLLCYKCITDTMQELVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDAAAHFEQMLGLAQRSQDELFHIALY 1040
WD40-rpts                                                                                      

Query     1041 NWLIQADLTDKLLEVNSPYLEDHLMHMIKQDQSKVRNMDLLWRYYEKNRSFGKAAHVLARLADMHSTEISLKQRLEYISR 1120
WD40-rpts                                                                                      

Query     1121 AILSAKSSSSVSSLGADGEFLHELEEKMEVVRIQVQIQETLRRQFSQHPSVQGAITQLDSELMDITKLYGEFADHFRLSE 1200
WD40-rpts                                                                                      

Query     1201 CKLAIIHCAGHSDPILVHSLWQEIIEKELNDSVVMSPSDRMRAVSLKLVSLGKLYAGTPRYFPLDFLVKFLEQEVCRLSW 1280
WD40-rpts                                                                                      

Query     1281 DVGFVTFTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKPLHLVECIHVLLSGYVDDPSRVPTYDRRRFTNACLDNICGY 1360
WD40-rpts                                                                                      

Query     1361 LVELQSLSPNAALQDIIRNFKSLQAKLEKLH 1391
WD40-rpts                                     

1 WD40-repeats found in QUERY=ENSDARP00000007708 (Len=1391):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   257-296      3.85  273.62  0.01272       20.0%     44.20

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  257-296    IPSLLQFSFSEDDPVVQIAVDNSRNILYTRSEKGVLQVYD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD