Input parameters:

  Query = ENSDARP00000008451 (Len=779)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000008451, Len=779):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEKMTRVSTINGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEDGFVERLNLRVGRKPSLNFSCADVMWHQME 80  
WD40-rpts             (_________________WD 1_________________)   (_____________________WD 2____

Query       81 ENLLATAATNGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSESV 160 
WD40-rpts      ________________)      (_________________WD 3_________________)   (_____________

Query      161 RDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMSTNRVKEIY 240 
WD40-rpts      ____WD 4_________________)    (_________________WD 5_________________)   (______

Query      241 CVQTIASVARVKWRPERRYHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVTTGIVWRHQHDPYFLLSGSKDSTLYQH 320 
WD40-rpts      _____________WD 6__________________)(____________________WD 7___________________

Query      321 MFKDASRPVDRANPEGLCFGLFGDLAFAAKESLMSAPASAGDVGRKTYPGGDRRYPIFFFKKPDVTEQFAQVSSALSVFE 400 
WD40-rpts      )(____________________WD 8____________________)                                 

Query      401 SEADSSAGMDWFINTAQSYLLSGKPFAELCEHNAHVAKSLNRPQESTTWTMLRIMFSEPANPSLSTNHNLNKSGNLPLVN 480 
WD40-rpts                                                                                      

Query      481 SFSMKEMSGALNERNKENRQDNIHSLETNLNNNDENEETEGSEGQAEYLFVDAELDDDELYSMEHDNQPAEESEYLLPQE 560 
WD40-rpts                                                                                      

Query      561 AFPLRHEIMDHPSAPEPLQEKQESPHVSGSEAESMCLTPMESFSLISVSQQLFSPHLPPKFFCPIVKEMLCYYAEQGDVQ 640 
WD40-rpts                                                                                      

Query      641 MAVSVLIVLGDRIRKEIDELMQEHWYMSYIDLLQRFELWNVSNEVIKLSTCGAIMCLNQASTTLHINCSNCKRPMSNKGW 720 
WD40-rpts                                                                                      

Query      721 ICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMEWLKQSKHCPAGCGHLCEYT 779 
WD40-rpts                                                                 

8 WD40-repeats found in QUERY=ENSDARP00000008451 (Len=779):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2     8-47       4.65  306.80  0.00456       17.5%     44.00
  WD 2:  Seg  6    51-97       5.52  342.64  0.00150       17.5%     39.56
  WD 3:  Seg  8   104-143      7.13  409.28  0.00019       32.5%     50.33
  WD 4:  Seg 12   147-186      7.59  428.15  0.00011       32.5%     51.66
  WD 5:  Seg 15   191-230      7.24  413.72  0.00017       30.0%     50.33
  WD 6:  Seg 19   234-276      4.86  315.42  0.00349       25.0%     46.94
  WD 7:  Seg 23   277-321      6.20  370.57  0.00063       25.0%     52.73
  WD 8:  Seg 27   322-367      4.10  284.22  0.00917        7.5%     13.98

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    8-47     STI---NGRTMFCHLD------APANAISV--CR--------DAT-QV---VVAG-RNIFKIYG
   WD 2   51-97     -DG---FVERLNLR-V------GRKPSLNF--SCADVMWHQMEEN-LL---ATAATNGAVVTWN
   WD 3  104-143    -NK---QEQLFTEH-K------RTVNKVCF--HP-------TEVN-ML---LSGSQDGFMKCFD
   WD 4  147-186    -KE---SVSTFSGQ-S------ESVRDVQF--SM-------KDYF-TF---AASFENGNVQLWD
   WD 5  191-230    -DR---YERMFTAH-T------GPVFCCDW--HP--------EDRGWL---ATGGRDKMVKVWD
   WD 6  234-276    -NR---VKEIYCVQ-T-----IASVARVKW--RP--------ERR-YHLATCSMMVDHNIYVWD
   WD 7  277-321    VRRPFIPFATFEEH-K------DVTTGIVWRHQH--------DPY-FL---LSGSKDSTLYQHM
   WD 8  322-367    FKD---ASRPVDRA-NPEGLCFGLFGDLAF--AA--------KES-LM---SAPASAGDVGRKT

   WD40 Template    TGE---CLRTLSGH-T------SGVTSVSF--SP--------DGK-RL---VSGSEDGTIKVWD