Input parameters:

  Query = ENSDARP00000008977 (Len=372)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000008977, Len=372):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSVALLVRYATLSGSRVCSRAAFNLTNAHQEDPRRALHTPSSPRFSNSRFDPDSSGRPTTWDSFGIWDNRIDEPILLPSS 80  
WD40-rpts                                                                                      

Query       81 IRYGKLIPKVNLSRVGSASQIGQRKENEDRYQMSQMTDNIMYFAVFDGHGGAEAADFCHKNMEKHIKDIAAEETNLEFVL 160 
WD40-rpts                                                                                      

Query      161 TKAFLEVDKALARHLHFSADASVLSAGTTATVALLRDGIELVVGSVGDSRAMMCRKGKAVKLTVDHTPERKDEKERIRRS 240 
WD40-rpts                                                             (________________________

Query      241 GGFITWNSLGQPHVNGRLAMTRSIGDFDLKATGVIAEPETKRISLHHVHDSFLALTTDGINFIMNSQEICDVINQCHDPK 320 
WD40-rpts      WD 1_______________________)                                                    

Query      321 EAAQRISEQALQYGSEDNSTIIVVPFGAWGKHKSSEVSFSFSRSFVSSGRFA 372 
WD40-rpts                                                          

1 WD40-repeats found in QUERY=ENSDARP00000008977 (Len=372):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   216-268      3.26  249.14  0.02701       20.0%      8.02

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  216-268    KGKAVKLTVDHTPERKDEKERIRRSGGFITWNSLGQPHVNGRLAMTRSIGDFD

   WD40 Template    TGECLRTLSGHTSGVTS-----------VSFSPDGKRLVSGSEDG--TIKVWD