Input parameters:

  Query = ENSDARP00000009353 (Len=564)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000009353, Len=564):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSSSATVRILIKGGKVVNDDFTQEADVYIENGIIQQVGKELMIPGGAKVIDATGKLVLPGGIDTSVHLNESFMNGTTAD 80  
WD40-rpts                                                                                      

Query       81 DFYSGTKAALAGGTTMVIGHVLPEKNESLLDAYEKARSHADAKACCDYALHMGVTWWGPKARAQMETLVRDKGVNSFQMY 160 
WD40-rpts                                                                                      

Query      161 MAYKDMYMLRDSELFQALQNCKDIGAVARVHAENGELVAEGAREALDLGISGPEGIEISRPEELEAEAVHRAITIANRAH 240 
WD40-rpts                                                                                      

Query      241 CPIYLVNVSSMSAGDVLASAKMQGKVVHGETTTAHAVLNGMQYYHQDWAHAAAFVTVPPLRLDPNTPNYLLSLLGNDTLN 320 
WD40-rpts                                                                                (_____

Query      321 VVTSDHRPFTTKQKAMGKDDFTKIPHGVPGVQDRMSVMWERGVVGGKMDENRFVAVTSSNAAKIYNLYPRKGRIIPGADA 400 
WD40-rpts      ______________________________________WD 1______________________________________

Query      401 DVVVWDPESTRTISVTTQWQGGDVNLYENLRCHGVPLVTISRGRVVYENGIFTCAEGSGKFYPLRTFPDYLYKKMVQREK 480 
WD40-rpts      _____)                                                                          

Query      481 CQALKGVERTPYTGDVAAVQNSGKKDLGPADGDMNPRPCTRHGGVRDLHESSFSLSGAQIDDNVPKRASARILAPPGGRS 560 
WD40-rpts                                                                                      

Query      561 SGIW 564 
WD40-rpts          

1 WD40-repeats found in QUERY=ENSDARP00000009353 (Len=564):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   315-406      3.08  241.90  0.03369       20.0%      5.70

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  315-406    GNDTLNVVTSDHRPFTTKQKAMGKDDFTKIPHGVPGVQDRMSVMWERGVVGGKMDENRFVAVTSSNAAKIYNLYPRKGRIIPGADADVVVWD

   WD40 Template    TGECLRTLSGHTSGVT---------SVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD