Input parameters:

  Query = ENSDARP00000010071 (Len=455)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000010071, Len=455):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEKVAFEGWLESVSTSFLVLSDQQRNQTLDHLISLSGAAQLRHLSNGLEALLKRDFLRLLPLELAFYLLRWLDPQTLLTC 80  
WD40-rpts                                                                                      

Query       81 CLVCKQWNKVINGCTEVWQSVCRDLGWRIDESIQDARHWKVIYLKAKLRMKQLREEDAFETSSLIGHSARVYALYYRDGL 160 
WD40-rpts                                                               (________________WD 1__

Query      161 LCTGSDDLSAKLWDVRTGQCVYGIQTHTCATVKFDEQKLVTGSFDNTIACWEWSTGAKIQQFRGHTGAVFSIDYNDELDT 240 
WD40-rpts      _____________)   (_______________WD 2______________)   (_________________WD 3___

Query      241 LVSGSADFTVKVWSLSAGTCVNTLTGHTEWVTKVHLQKSQVESMMHSPGDYILLSVDKYEIKVWPIGREINCKCLKTLSV 320 
WD40-rpts      _____________)   (_____________________WD 4_____________________)      (________

Query      321 SEDRSVCLQPRLQFDGRYIVCCSDLGIYQWDFASFDVIRVIKPQQDPSSLSLLSFGEVFALLFDNHHLYVLDLRTEVTVG 400 
WD40-rpts      _________WD 5_________________)   (________________WD 6________________)        

Query      401 RWPLPAYRKSKRGSSFLAGVTSWLNGLDGKNDAGLVFATSMPDHSIHLVLWRENG 455 
WD40-rpts                (_________________WD 7_________________)     

7 WD40-repeats found in QUERY=ENSDARP00000010071 (Len=455):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   138-174      6.09  366.11  0.00072       27.5%     46.50
  WD 2:  Seg  7   178-212      7.48  423.52  0.00012       32.5%     46.15
  WD 3:  Seg 10   216-254     10.37  542.93  3.0e-06       40.0%     54.37
  WD 4:  Seg 14   258-305      8.26  456.01  4.4e-05       37.5%     53.75
  WD 5:  Seg 18   312-351      6.14  368.27  0.00068       32.5%     48.60
  WD 6:  Seg 22   355-392      6.51  383.38  0.00042       15.0%     47.65
  WD 7:  Seg 27   411-450      6.34  376.71  0.00052       20.0%     44.80

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  138-174    AFETSSLIGHSARVY--ALYYRD---------G---LLCTGSDDLSAKLWD
   WD 2  178-212    GQCVYGIQTHT------CATVKF---------D-EQKLVTGSFDNTIACWE
   WD 3  216-254    GAKIQQFRGHTGAVF--SIDYND---------E-LDTLVSGSADFTVKVWS
   WD 4  258-305    GTCVNTLTGHTEWVT--KVHLQKSQVESMMHSP-GDYILLSVDKYEIKVWP
   WD 5  312-351    CKCLKTLSVSEDRSVCLQPRLQF---------D-GRYIVCCS-DLGIYQWD
   WD 6  355-392    FDVIRVIKPQQD-PS--SLSLLS---------F-GEVFALLFDNHHLYVLD
   WD 7  411-450    KRGSSFLAGVTSWLN--GLDGKN---------DAGLVFATSMPDHSIHLVL

   WD40 Template    GECLRTLSGHTSGVT--SVSFSP---------D-GKRLVSGSEDGTIKVWD